DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sina and SIAH3

DIOPT Version :10

Sequence 1:NP_476725.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_942146.2 Gene:SIAH3 / 283514 HGNCID:30553 Length:269 Species:Homo sapiens


Alignment Length:266 Identity:105/266 - (39%)
Similarity:145/266 - (54%) Gaps:43/266 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 CFDYVLPPI-----------LQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAMEKVASNVKFP 129
            ||..||..|           :..::|.||||.            .|..|::.::..:..:. ..|
Human     7 CFGAVLDLIHLRFQHYKAKRVFSAAGQLVCVV------------NPTHNLKYVSSRRAVTQ-SAP 58

  Fly   130 --------------CKHSGYGCTASLVYTEKTEHEE----TCECRPYLCPCPGASCKWQGPLDLV 176
                          |.|..:.......:.....|:|    .....|.||.||..||:|:|.|::|
Human    59 EQGSFHPHHLSHHHCHHRHHHHLRHHAHPHHLHHQEAGLHANPVTPCLCMCPLFSCQWEGRLEVV 123

  Fly   177 MQHLMMSHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIV 241
            :.||...|: :..|||.:|||||||::||...||::|.||.||||:|||.|||:::||.||||.:
Human   124 VPHLRQIHR-VDILQGAEIVFLATDMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATM 187

  Fly   242 QLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLG 306
            .|||:..:|:.|.||||||.|.|||.|||.|||:.|.|.|.|.:.||||.:||:||||:|||:|.
Human   188 MLIGTPTQADCFTYRLELNRNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLA 252

  Fly   307 INVTIS 312
            |.:.|:
Human   253 IGIAIT 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinaNP_476725.1 RING_Ubox 68..118 CDD:473075 12/52 (23%)
Sina 114..310 CDD:460824 92/213 (43%)
SIAH3NP_942146.2 Sina 133..259 CDD:239753 74/126 (59%)

Return to query results.
Submit another query.