DRSC/TRiP Functional Genomics Resources

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Protein Alignment sina and Siah2

DIOPT Version :10

Sequence 1:NP_476725.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_033200.2 Gene:Siah2 / 20439 MGIID:108062 Length:325 Species:Mus musculus


Alignment Length:305 Identity:222/305 - (72%)
Similarity:247/305 - (80%) Gaps:15/305 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PTAAAAGAGATGVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSA---DLTSLFEC 73
            |:.||..|.||           .|:||..|||..::::..|...||||...:|.   :|||||||
Mouse    28 PSPAAPPAAAT-----------ISAAGPGSSAVPAAAAVISGPGAGGGADPVSPQHHELTSLFEC 81

  Fly    74 PVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLA-NIRNLAMEKVASNVKFPCKHSGYGC 137
            ||||||||||||||.:|||||..||.||:|||||||.|. :|||||||||||.|.||||::..||
Mouse    82 PVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGC 146

  Fly   138 TASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDI 202
            :.:|.:|||.|||:.||.|||.||||||||||||.|:.||.|||.:|||||||||||||||||||
Mouse   147 SLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLATDI 211

  Fly   203 NLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLT 267
            |||||||||||||||||||||||||||||:|||||||||.|||:||:||||.|||||||||||||
Mouse   212 NLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLT 276

  Fly   268 WEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLGINVTIS 312
            |||.|||||:|||:||.|||||||||:||.|||||||||||||||
Mouse   277 WEATPRSIHDGVAAAIMNSDCLVFDTAIAHLFADNGNLGINVTIS 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinaNP_476725.1 RING_Ubox 68..118 CDD:473075 40/50 (80%)
Sina 114..310 CDD:460824 162/195 (83%)
Siah2NP_033200.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 7/25 (28%)
RING-HC_SIAH2 76..126 CDD:438410 39/49 (80%)
Sina 123..319 CDD:460824 162/195 (83%)
SBD. /evidence=ECO:0000250|UniProtKB:P61092 131..323 158/191 (83%)

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