DRSC/TRiP Functional Genomics Resources

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Protein Alignment sina and LOC1280786

DIOPT Version :10

Sequence 1:NP_476725.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_061509545.1 Gene:LOC1280786 / 1280786 VectorBaseID:AGAMI1_000819 Length:531 Species:Anopheles gambiae


Alignment Length:203 Identity:52/203 - (25%)
Similarity:85/203 - (41%) Gaps:22/203 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FECPVCFDYVLPPILQCSS-GHLVCVSCR--SKLTCCPTCRGPL--ANIRNLAMEKVASNVKFPC 130
            :.|..|.::....:.||:: .|..|.:|:  ...|.| ||...|  ..:.| .:||:......||
Mosquito     4 WRCKQCCNFPNGEVYQCAAKDHFYCATCKESKNRTLC-TCGAKLKDGKVPN-PIEKLLHQAMCPC 66

  Fly   131 KHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGAS---CKWQGPLDLVMQHLMMSHKSITTL-- 190
            :::..|||...|.:|...|...|..|||.|.....:   |.|||....:..||...||.:..:  
Mosquito    67 RYAPNGCTWKFVQSEMDAHLVECRFRPYRCVAASLNVIKCNWQGLQHEIEDHLAKGHKELGEVFR 131

  Fly   191 --QGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENF 253
              :...:|| ...|:|.|    :.:...|...|:.......   .|::...::...|.|:||..:
Mosquito   132 FRESTSLVF-KEQISLGG----LKLVDAFSKRFLFYFFSDV---AHKKLSFLMLYFGRREEAAQY 188

  Fly   254 VYRLELNG 261
            .|.||::|
Mosquito   189 CYELEISG 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sinaNP_476725.1 RING_Ubox 68..118 CDD:473075 13/51 (25%)
Sina 114..310 CDD:460824 40/155 (26%)
LOC1280786XP_061509545.1 None

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