DRSC/TRiP Functional Genomics Resources

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Protein Alignment kud and AT4G29735

DIOPT Version :9

Sequence 1:NP_001246807.1 Gene:kud / 39882 FlyBaseID:FBgn0036667 Length:78 Species:Drosophila melanogaster
Sequence 2:NP_001154276.1 Gene:AT4G29735 / 829095 AraportID:AT4G29735 Length:98 Species:Arabidopsis thaliana


Alignment Length:91 Identity:35/91 - (38%)
Similarity:45/91 - (49%) Gaps:21/91 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPVNPAVFPHLATVLLVIGTFFTAWFFI-----------------FV----VSRKSSKESTLIKE 52
            ||:..|::|.|:...|.||...||.|||                 ||    .:..|.|..::.||
plant     8 SPIPVALYPTLSVFTLAIGLVITAIFFIVEHLPFKGWQVLGDMIRFVKVIYEATSSRKNRSVGKE 72

  Fly    53 LLISLCASIFLGFGIVFLLLTVGIYV 78
            |..|..||:|||||.:||||..|:||
plant    73 LATSAVASVFLGFGSLFLLLASGVYV 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kudNP_001246807.1 Ost5 5..78 CDD:398770 33/89 (37%)
AT4G29735NP_001154276.1 UPF0197 5..98 CDD:283027 33/89 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4452
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54957
OrthoDB 1 1.010 - - D1627291at2759
OrthoFinder 1 1.000 - - FOG0004806
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105881
Panther 1 1.100 - - LDO PTHR13636
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.790

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