DRSC/TRiP Functional Genomics Resources

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Protein Alignment TSG101 and ELC-Like

DIOPT Version :9

Sequence 1:NP_524120.1 Gene:TSG101 / 39881 FlyBaseID:FBgn0036666 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_196890.1 Gene:ELC-Like / 831232 AraportID:AT5G13860 Length:368 Species:Arabidopsis thaliana


Alignment Length:434 Identity:107/434 - (24%)
Similarity:175/434 - (40%) Gaps:118/434 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PAVEETQITKYLSK---------YKYVAATK----KDVVDVVTSFRSLTYDLQRFVFNDGSSKEL 53
            |..:..:|.::||.         ..|...||    :.::::::|:.||......|..|||.|..|
plant     4 PPAKMQEIHQFLSSALTQRGPSALPYAENTKSLIRQHLLNLISSYTSLDPKTATFTHNDGRSVIL 68

  Fly    54 FTIQGTIPVVYKNNTYYIPICIWLMDTHPQNAPMCFVKPTPTMQIK-VSMYVDHNGKVYLPYLHD 117
            ....||||:.::..:|.||:.|||::::||..|..:|.||..|.|| ....|..:|.|.||||.:
plant    69 LQADGTIPMPFQGVSYNIPVVIWLLESYPQYPPCVYVNPTRDMIIKRPHSNVSPSGLVSLPYLQN 133

  Fly   118 WQPHSSDLLSLIQVMIVTFGDHPPVYSKPKEQIAAPYPTNSYMPQPGAPGGSNSFLPYPTAGGAG 182
            |...||:|:.|...:...|...||:||:.:                                   
plant   134 WIYPSSNLVDLASHLSAAFSRDPPLYSQRR----------------------------------- 163

  Fly   183 GSNFPPYPTGSNVGPYPPTPAGPAGGSGYPAYPNFIQPTAGGYPPAAGYNPSNPSSTGTITEEHI 247
                            ||....|:.||||.                   .|..|..|....|.:.
plant   164 ----------------PPPQPSPSIGSGYS-------------------RPLPPRQTDDAAEVYK 193

  Fly   248 KASIISAIDDKLRRRVQEKVN------QYQAEIET---------LNRTKQELLEGSAKIDAIIER 297
            |.:|         .|:.|.|:      :...|:||         |.|.::|:..|..::....|.
plant   194 KNAI---------NRIVEMVHGDIVLMRSAREVETEGLLSLQSDLKRREEEINNGFKEMVIEKET 249

  Fly   298 LEREHIDMQKNISIL----KDKEQELEKALEDLESAEAINPDEAVTTTAPLYRQLLNAYADEAAT 358
            ||::...:..|..:|    ::.:.:.:..|.||:      .|::......|.:|:|...|.:.|.
plant   250 LEQQLQVIAMNTDVLGSWIRENQGKAKDLLVDLD------VDDSFECIDSLSKQMLECTALDLAI 308

  Fly   359 EDAIYYLGEGLRGGVIDLETFLKHVRQLSRKQFILRATMQKCRQ 402
            ||.:|.:.:..|.|.:..:.:|::||.|||:||..|||.:|.|:
plant   309 EDVVYSMDKSFRDGSLPFDQYLRNVRLLSREQFFHRATAEKVRE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSG101NP_524120.1 UEV 22..140 CDD:283415 43/122 (35%)
ARS2 <149..227 CDD:282772 7/77 (9%)
TBPIP <242..353 CDD:284512 25/129 (19%)
Vps23_core 336..393 CDD:286532 18/56 (32%)
ELC-LikeNP_196890.1 UEV 37..156 CDD:399041 41/118 (35%)
Vps23_core 288..345 CDD:401418 18/56 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2826
eggNOG 1 0.900 - - E1_KOG2391
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4584
Inparanoid 1 1.050 137 1.000 Inparanoid score I1812
OMA 1 1.010 - - QHG54978
OrthoDB 1 1.010 - - D1435538at2759
OrthoFinder 1 1.000 - - FOG0001267
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102944
Panther 1 1.100 - - LDO PTHR23306
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3220
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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