DRSC/TRiP Functional Genomics Resources

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Protein Alignment nudC and BOB1

DIOPT Version :9

Sequence 1:NP_001246805.1 Gene:nudC / 39879 FlyBaseID:FBgn0021768 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_200152.1 Gene:BOB1 / 835421 AraportID:AT5G53400 Length:304 Species:Arabidopsis thaliana


Alignment Length:333 Identity:138/333 - (41%)
Similarity:193/333 - (57%) Gaps:42/333 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILLAVAEKHHGGVP---EFLGTLAS-----FLRRKTDFFTGAKQTEWEKLLLDVFNKESKLAVTE 67
            |:..|.|:.....|   .|..||:|     ||.:..||.  .:|:::    |...:.|.::.|..
plant     3 IISEVEEESSSSRPMIFPFRATLSSANPLGFLEKVFDFL--GEQSDF----LKKPSAEDEIVVAV 61

  Fly    68 NYEKIKAREASQRLKAEKER---AERKARKQEIDDNKICDITDEEAAAIIKEEETKKRQQLLDSA 129
            ...|.|.::|.:: |||||.   .|:||.|:                 |:|..|.|..:   :|.
plant    62 RAAKEKLKKAEKK-KAEKESVKPVEKKAEKE-----------------IVKLVEKKVEK---ESV 105

  Fly   130 GGEPSASNRDGISKPIEKVDDESDKSELGKLMPNAGNGCTLENYTWTQTLEEVELKIPFNLTFGL 194
            ....:||:.:.|.  :||..:|.:|.|.|.::||.|||..||||:|.|.|:||.:.||  :..|.
plant   106 KPTIAASSAEPIE--VEKPKEEEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIP--VPTGT 166

  Fly   195 RARDLVISIGKKSLKVGIKGQTPIIDGELCGEVKTEESVWVLQDSKTVMITLDKINKMNWWSRLV 259
            :||.:|..|.|..||||:|||.||:||||...||.::..|.::|.|.:.|.|.|.::|.||...|
plant   167 KARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKSDQMEWWKCCV 231

  Fly   260 TTDPEISTRKINPESSKLSDLDGETRSMVEKMMYDQRQKELGLPTSEDRKKQDILEKFKQQHPEM 324
            ..:|||.|:|:.||:|||.|||.||||.|||||:|||||::||||||:.:||:||:||..:||||
plant   232 KGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQKQEILKKFMSEHPEM 296

  Fly   325 DFSKCKFN 332
            |||..|||
plant   297 DFSNAKFN 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nudCNP_001246805.1 Nudc_N 7..58 CDD:290757 14/54 (26%)
p23_mNUDC_like 173..259 CDD:107241 38/85 (45%)
BOB1NP_200152.1 p23_NUDC_like 147..231 CDD:107224 38/85 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 119 1.000 Domainoid score I1908
eggNOG 1 0.900 - - E1_KOG2265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4812
Inparanoid 1 1.050 222 1.000 Inparanoid score I1195
OMA 1 1.010 - - QHG56463
OrthoDB 1 1.010 - - D1474731at2759
OrthoFinder 1 1.000 - - FOG0003931
OrthoInspector 1 1.000 - - otm3164
orthoMCL 1 0.900 - - OOG6_102007
Panther 1 1.100 - - LDO PTHR12356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2707
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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