DRSC/TRiP Functional Genomics Resources

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Protein Alignment nudC and AT4G27890

DIOPT Version :9

Sequence 1:NP_001246805.1 Gene:nudC / 39879 FlyBaseID:FBgn0021768 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_194518.1 Gene:AT4G27890 / 828902 AraportID:AT4G27890 Length:293 Species:Arabidopsis thaliana


Alignment Length:285 Identity:110/285 - (38%)
Similarity:164/285 - (57%) Gaps:29/285 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LLDVFNKESKLAVTENYEK---IKAREASQRLK-AEKERAERKA-RKQEIDDNKICDITDEEAAA 112
            :|||..|||.....:..||   .....|.|||: |||::.|::: :..|::..|...:...|.  
plant    33 VLDVIGKESNFLKKDTAEKEIVAAVMAAKQRLREAEKKKLEKESVKSMEVEKPKKDSLKPTEL-- 95

  Fly   113 IIKEEETKKRQQLLDSAGGEPSASNRDGISKPIEKVDDESDKSELGKLMPNAGNGCTLENYTWTQ 177
                 |..|.:.|:              .:.|:| ::...::.|.|.::||.|||...|.|:|.|
plant    96 -----EKPKEESLM--------------ATDPME-IEKPKEEKESGPIVPNKGNGLDFEKYSWGQ 140

  Fly   178 TLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGIKGQTPIIDGELCGEVKTEESVWVLQDSKTV 242
            .|:||.:.||  :..|.::|.:...|.|..||||:|||..|:|||....||.::..|.::|.|.:
plant   141 NLQEVTINIP--MPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMI 203

  Fly   243 MITLDKINKMNWWSRLVTTDPEISTRKINPESSKLSDLDGETRSMVEKMMYDQRQKELGLPTSED 307
            .:.|.|.::|.||...|..:|||.|:|:.||:|||.|||.|||:.|||||:|||||::|||.|::
plant   204 SVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDE 268

  Fly   308 RKKQDILEKFKQQHPEMDFSKCKFN 332
            .:|:|:|:||..|:|.||||..|||
plant   269 IEKKDMLKKFMAQNPGMDFSNAKFN 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nudCNP_001246805.1 Nudc_N 7..58 CDD:290757 3/4 (75%)
p23_mNUDC_like 173..259 CDD:107241 33/85 (39%)
AT4G27890NP_194518.1 p23_NUDC_like 136..220 CDD:107224 33/85 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 119 1.000 Domainoid score I1908
eggNOG 1 0.900 - - E1_KOG2265
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4812
Inparanoid 1 1.050 222 1.000 Inparanoid score I1195
OMA 1 1.010 - - QHG56463
OrthoDB 1 1.010 - - D1474731at2759
OrthoFinder 1 1.000 - - FOG0003931
OrthoInspector 1 1.000 - - otm3164
orthoMCL 1 0.900 - - OOG6_102007
Panther 1 1.100 - - O PTHR12356
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2707
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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