DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment nudC and nudcd2

DIOPT Version :9

Sequence 1:	NP_001246805.1	Gene:	nudC / 39879	FlyBaseID:	FBgn0021768	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_001016379.1	Gene:	nudcd2 / 549133	XenbaseID:	XB-GENE-1003676	Length:	157	Species:	Xenopus tropicalis

Alignment Length:	165	Identity:	44/165 - (26%)
Similarity:	77/165 - (46%)	Gaps:	50/165 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   167 GCTLENYTWTQTLEEV--ELKIPFNLTFGLRARDLVISIGKKSLKVGIKGQTPIIDGELCGEVKT 229
            ||      |.||:|||  |:|:|    .|..|:::...:|.:.:.:.:||: .|:.|:|.....:
Frog    19 GC------WYQTMEEVFIEVKVP----DGTLAKEVQCKLGSRDISLVVKGK-DILKGKLFDSTIS 72

  Fly   230 EESVWVLQDSKTVMITLDKINK--MNWWSRLVTTDPEISTRKINPESSKLSDLDGETRSMVEKMM 292
            :|:.|.|:|.|.:.|.|.|.|:  .|.|:.|                     |:|:..:  :..:
Frog    73 DEATWTLEDRKLIRIILTKTNRDAGNCWTSL---------------------LEGDYSA--DPWI 114

  Fly   293 YDQRQKELGLPTSEDRKKQDILEKFKQQHPEMDFS 327
            .|:.||:|            .||:|::::|..|||
Frog   115 QDEMQKKL------------TLERFQRENPGFDFS 137

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
nudC	NP_001246805.1	Nudc_N	7..58	CDD:290757
nudC	NP_001246805.1	p23_mNUDC_like	173..259	CDD:107241	28/89 (31%)
nudcd2	NP_001016379.1	p23_NUDCD2_like	12..104	CDD:107243	31/116 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910