DRSC/TRiP Functional Genomics Resources

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Protein Alignment nudC and Nudcd3

DIOPT Version :10

Sequence 1:NP_648923.1 Gene:nudC / 39879 FlyBaseID:FBgn0021768 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_776109.1 Gene:Nudcd3 / 209586 MGIID:2144158 Length:363 Species:Mus musculus


Alignment Length:376 Identity:93/376 - (24%)
Similarity:178/376 - (47%) Gaps:70/376 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAEEGKFDNILLAVAEKHHGGVPEFLGTLASFLRRKTDFF-------------TGAKQTEWEKLL 53
            |||  .:|..||.:.: |.|.|.:||..|..||.|||||:             .||.|.    |:
Mouse     5 AAE--LYDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFYRLLRHPSDRMGFPPGAAQA----LV 62

  Fly    54 LDVFNKESKLAVTENYEKIKAREASQRLKAEKERAERKARK---------QEIDDNKICDITDEE 109
            |.||.....:|..::.::.|..|...|.|.|:.:|...|..         ||::.:...|::..:
Mouse    63 LQVFKTFDHMARQDDEKRKKELEEKIRKKEEEAKALPAAETEKVAVPVPVQEVEIDAAADLSGPQ 127

  Fly   110 AAAIIKEEETKKRQ----------QLLDSAGGEPSASNRDGISKP--IEKVDDESDKSELGKLMP 162
            .   :::||....|          :..::.|...||:  :|...|  :.::.::..|:      |
Mouse   128 E---VEKEEPPGSQDPEHTVTHGLEKAEAPGTVSSAA--EGPKDPPVLPRIQEQFQKN------P 181

  Fly   163 NAGNGCTLENYTWTQTLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGI---KGQTPIIDGELC 224
            ::.||...|||.|:|...::|:::|.. ...::.:.:.:::...:::|.:   .|:..:::|:|.
Mouse   182 DSYNGAIRENYIWSQDYTDLEVRVPVP-KHVMKGKQVSVALSSGTIRVAMVEENGERVLMEGKLT 245

  Fly   225 GEVKTEESVWVLQDSKTVMITLDKINKMNWWSRLVTTDPEISTRKINPESSKLSDLDGETRSMVE 289
            .::.||.|:|.|:..:.|::.|.|:.:. |||.::..:..|...|||.|.| ::.:|.|.:::::
Mouse   246 HKINTESSLWSLEPGRCVLVNLSKVGEY-WWSAILEGEEPIDIDKINKERS-MATVDEEEQAVLD 308

  Fly   290 KMMYDQRQKELGLPTSEDRKKQDILEK--------FKQQHPEMDFSKCKFN 332
            ::.:|..||..|.|.|.:.|..::|:|        |:.|.    |....||
Mouse   309 RLTFDYHQKLQGKPQSHELKVHEMLKKGWDAEGSPFRGQR----FDPAMFN 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nudCNP_648923.1 Nudc_N 7..58 CDD:464073 22/63 (35%)
p23_mNUDC_like 173..259 CDD:107241 20/88 (23%)
Nudcd3NP_776109.1 Nudc_N 9..67 CDD:464073 22/62 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..143 4/25 (16%)
p23_NUDCD3_like 186..287 CDD:107244 24/102 (24%)

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