Protein Alignment nudC and Nudcd3

DIOPT Version :9

• Sequence 1: NP_001246805.1
• Gene: nudC / 39879
• FlyBaseID: FBgn0021768
• Length: 332
• Species: Drosophila melanogaster
• Sequence 2: XP_038947459.1
• Gene: Nudcd3 / 100125378
• RGDID: 1642416
• Length: 363
• Species: Rattus norvegicus
• Alignment Length: 384
• Identity: 94/384 - (24%)
• Similarity: 178/384 - (46%)
• Gaps: 86/384 - (22%)

  Fly     2 AAEEGKFDNILLAVAEKHHGGVPEFLGTLASFLRRKTDFF-------------TGAKQTEWEKLL 53
            |||  .:|..||.:.: |.|.|.:||..|..||.|||||:             .||.|.    |:
  Rat     5 AAE--LYDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFYRLLRHPTDRMGFPPGAAQA----LV 62

  Fly    54 LDVFNKESKLAVTENYEKIKAREASQRLKAEKERAERKARKQEIDDNKICDITDEEAAAIIKEEE 118
            |.||         :.::.:..::..:|    |:..|.|.||:|.:...:...|.|:.|..:..:|
  Rat    63 LQVF---------KTFDHMARQDDEKR----KKELEEKIRKKEEEAKAVAAATAEKEAVPVPVQE 114

  Fly   119 TK-------------KRQQLLDSAGGE--------------PSASNRDGISKP--IEKVDDESDK 154
            .:             ::::|....|.|              .::|..:|...|  :.::.::..|
  Rat   115 VEIDATTALSGPREVEKEELPGPQGPERKVTHGSEEAEAPGTASSAAEGPKDPPVLPRIQEQFQK 179

  Fly   155 SELGKLMPNAGNGCTLENYTWTQTLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGI---KGQT 216
            :      |::.||...|||||:|...::|:::|.. ...::.:.:.:::...|::|.:   .|:.
  Rat   180 N------PDSYNGAIRENYTWSQDYTDLEVRVPVP-KHVVKGKQVSVALSSGSIRVAMLEENGER 237

  Fly   217 PIIDGELCGEVKTEESVWVLQDSKTVMITLDKINKMNWWSRLVTTDPEISTRKINPESSKLSDLD 281
            .:::|:|..::.||.|:|.|:..|.|::.|.|:.:. |||.::..:..|...|||.|.| ::.:|
  Rat   238 VLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVGEY-WWSAILEGEEPIDIDKINKERS-MATVD 300

  Fly   282 GETRSMVEKMMYDQRQKELGLPTSEDRKKQDILEK--------FKQQHPEMDFSKCKFN 332
            .|.:::::::.:|..||..|.|.|.:.|..::|:|        |:.|.    |....||
  Rat   301 EEEQAVLDRLTFDYHQKLQGKPQSHELKVHEMLKKGWDAEGSPFRGQR----FDPAMFN 355

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nudC	NP_001246805.1	Nudc_N	7..58	CDD:290757	22/63 (35%)
		p23_mNUDC_like	173..259	CDD:107241	23/88 (26%)
Nudcd3	XP_038947459.1	Nudc_N	9..67	CDD:404860	23/71 (32%)
		p23_NUDCD3_like	186..287	CDD:107244	27/102 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910