DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9674 and ygfK

DIOPT Version :9

Sequence 1:NP_001246804.1 Gene:CG9674 / 39878 FlyBaseID:FBgn0036663 Length:2115 Species:Drosophila melanogaster
Sequence 2:NP_417354.1 Gene:ygfK / 949068 ECOCYCID:G7497 Length:1032 Species:Escherichia coli


Alignment Length:873 Identity:194/873 - (22%)
Similarity:328/873 - (37%) Gaps:237/873 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1331 DDNVTVKMRIHNEERAF-----GSTLSYHIACKYGEAGL---PAGKSIDIFLEGSAGQSFC---- 1383
            |:.:.....:|..|..|     |.:..::::..|...|:   |..:.||..::.|....|.    
E. coli   120 DEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFAQYRD 184

  Fly  1384 ---------AFLAR-----------------------GVNVTLKGDANDYVGKGLC-------GG 1409
                     |||||                       ||.::.......:..:.:|       |.
E. coli   185 TLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAICRYMLEEKGL 249

  Fly  1410 NVVIMPQDTVPFESHLNVIVGNVCLYGATEGTAYFRGIASERFCVRNSGVTAVVEGVGDHGCEYM 1474
            |..:....|:...:.:..|: :||.:|       :.|:..|.|               ||.    
E. coli   250 NTFVKLNPTLLGYARVREIL-DVCGFG-------YIGLKEESF---------------DHD---- 287

  Fly  1475 TGGVVVILGLTGRNFAAGMSGGIAYVYDLDGSFKPKVNPESVELLPLEIEKDVLLVKELLADFIE 1539
                   |.||                            :::|:|    |:.:.|.||....|  
E. coli   288 -------LKLT----------------------------QALEML----ERLMALAKEKSLGF-- 311

  Fly  1540 KTGSKVAKEL--LDNWAEAQGKFV-----KVFPYEYQKALKDMAEQQAVEQPLKSAIENGNGKHE 1597
              |.|:...|  ::|.....|:.:     .:||.....|   ....:|.:.  |..|....|..:
E. coli   312 --GVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVA---AVLSRAFDG--KLPISYSGGASQ 369

  Fly  1598 PHIKDI-EEAIQDVVLEQKRADRVLDKTRGFVKYKRESAPYRDAGERQKDW--DEV--------- 1650
            ..|:|| :..|:.:.:...     |.|..|   |.|.||..|:. |....|  |.|         
E. coli   370 LTIRDIFDTGIRPITMATD-----LLKPGG---YLRLSACMREL-EGSDAWGLDHVDVERLNRLA 425

  Fly  1651 -------YNFPHVRKNLKVQAARCM---ECGVPFCQSNSTGCPLGNIIPKWNDLVFHGEWQEALR 1705
                   |...|.:...:::.|..:   :|.|..|   .|.|.:...||::..|:....:.:||.
E. coli   426 ADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPC---VTACAIKQDIPEYIRLLGEHRYADALE 487

  Fly  1706 QLLQTNNFPEFTGRVCPAPCEGSCVLGISEPAVTIKNIECAIIDHA---FEQGWIKPEIPEVRTG 1767
            .:.|.|..|..||.:|...|:.:|.....:.|:.|:.::...::..   ::|.|.||    ..:|
E. coli   488 LIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKP----AGSG 548

  Fly  1768 KR--VAIVGSGPSGLAASQQLNRAGHFVTVFERNDRVGGLLQYGIPTMKLSKEVVKRRVDLMADE 1830
            .|  ||::|:||:||||...|.||||.||:|||....||:::..||..::..|:::..:|.:|..
E. coli   549 SRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAH 613

  Fly  1831 GIEFRTNVHVGKDLKAEQLL-QEYDAVLLTTGSTWPRDLPLA--NRDL-KGIHFAMEFLEAQQKK 1891
            |::|...  ...||..|||. |.:..||:.||:.....:.||  |::: |.:.|..|:.:....|
E. coli   614 GVKFEYG--CSPDLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALK 676

  Fly  1892 QLGGKNDIISAAGKNVIIIGGGDTGCDCIATSLR-QGAKSITTFEILPEPPQKRAQDNPWPQWPK 1955
                       .||:|:::|.|:|..||...:|| .|.:..|..        .|......|.|  
E. coli   677 -----------LGKHVVVVGAGNTAMDCARAALRVPGVEKATIV--------YRRSLQEMPAW-- 720

  Fly  1956 VFRVDYG---HEEVKLKWGKDPRQYCTTTKEFVGENGAIKGVNTVEVEWTKTETGQWRMQEVAGS 2017
              |.:|.   |:.|:.::..:|.::            ...|..|:.|........:.|.:.|..:
E. coli   721 --REEYEEALHDGVEFRFLNNPERF------------DADGTLTLRVMSLGEPDEKGRRRPVETN 771

  Fly  2018 EKY-FPADLILLAMGFLGPEKTVPSELGLELDPRGNIKAS-NGQYGTSNSKVFAAGDCRRGQSLV 2080
            |.. ...|.::.|:|.....:.: :.:|:.||..|..... ||:  |..:.||..||.:||.|.:
E. coli   772 ETVTLLVDSLITAIGEQQDTEAL-NAMGVPLDKNGWPDVDHNGE--TRLTDVFMIGDVQRGPSSI 833

  Fly  2081 VWAITEGRQA-----------ARQVDSY 2097
            |.|:...|:|           :.|.|.|
E. coli   834 VAAVGTARRATDAILSRENIRSHQNDKY 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9674NP_001246804.1 gltB 75..1565 CDD:236968 47/291 (16%)
GATase_2 88..504 CDD:278726
Glu_syn_central 543..828 CDD:282720
GltS_FMN 918..1271 CDD:239202
gltB_C 1316..1565 CDD:238482 47/291 (16%)
gltD 1623..2106 CDD:237213 135/522 (26%)
Fer4_8 1645..1756 CDD:302761 27/134 (20%)
NAD_binding_8 1772..>1804 CDD:290186 17/31 (55%)
ygfKNP_417354.1 PRK09853 1..1029 CDD:236630 194/873 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
21.910

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