DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9674 and F20D6.11

DIOPT Version :9

Sequence 1:NP_001246804.1 Gene:CG9674 / 39878 FlyBaseID:FBgn0036663 Length:2115 Species:Drosophila melanogaster
Sequence 2:NP_505112.1 Gene:F20D6.11 / 179196 WormBaseID:WBGene00017640 Length:549 Species:Caenorhabditis elegans


Alignment Length:460 Identity:102/460 - (22%)
Similarity:176/460 - (38%) Gaps:148/460 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1718 GRV-CPAPCEGSC--------------------VLGISEPAVTIKNIECAI-----IDHAFEQGW 1756
            ||: |  |..|:|                    |:.:::..:.||..|..:     |.|      
 Worm    78 GRIRC--PLHGACFNVRSGDIEDYPGFDSLHSYVVTVNDGNLIIKTTEKKLGSDRRIRH------ 134

  Fly  1757 IKPEIPEVR--TGKRVAIVGSGPSGLAASQQLNRAGHFVTVFERNDRVGGLLQYGIPTMKLSKE- 1818
                :|:::  ..:.|.|:|.|.:              ...|..:.|:.||:   .|.:.:|:| 
 Worm   135 ----LPKMKQCNDRPVVIIGGGVA--------------TATFIEHSRLNGLI---TPILVISEES 178

  Fly  1819 -------------------VVKRRVDLMADE-GIEF--RTNV----HVGKDL---KAEQLLQEYD 1854
                               :..|:.|...:| .::|  :|:|    |..:::   ..|.::  |.
 Worm   179 LPPYDRVLLSKKPAATGEDIRLRKDDAFYEERNVKFLLKTSVIAVNHKSREVSLSNGETVV--YS 241

  Fly  1855 AVLLTTGSTWPRDLPLANRDLKGIHFAMEFLEAQQKKQLGGKNDIIS--AAGKNVIIIGGGDTGC 1917
            .:::.||.. .|.|.:...|||.|.:..:..||          :|||  ..||:|:.:|....|.
 Worm   242 KLIIATGGN-VRKLQVPGSDLKNICYLRKVEEA----------NIISNLHPGKHVVCVGSSFIGM 295

  Fly  1918 DCIATSLRQGAKSITTFEILPEP-PQKRAQDNPWPQWPKVFRVDYGHEEVKLKWGKDPRQYCTTT 1981
            : :|::|.:.|.|:|.....||| |              ||..|.| :.::||:.:...::    
 Worm   296 E-VASALAEKAASVTVISNTPEPLP--------------VFGSDIG-KGIRLKFEEKGVKF---- 340

  Fly  1982 KEFVGENGAIKGVNTVEVEWTKTETGQWRMQEVAGSEKYFPADLILLAMGFLGPEKTVPSELGLE 2046
             |......|::|.:..||.....|.|           |....||::..:|.....|.:... |::
 Worm   341 -ELAANVVALRGNDQGEVSKVILENG-----------KELDVDLLVCGIGVTPATKFLEGS-GIK 392

  Fly  2047 LDPRGNIKASNGQYGTSNSKVFAAGDCRRGQSLVVWAIT-------EGRQAARQVDSY-LTGRPS 2103
            ||.||.|:... ::.|:.|.:||.||.... .|.:|.|.       :..||..|...| :.|:|.
 Worm   393 LDNRGFIEVDE-KFRTNISYIFAMGDVVTA-PLPLWDIDSINIQHFQTAQAHGQHLGYTIVGKPQ 455

  Fly  2104 GLPGP 2108
              |||
 Worm   456 --PGP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9674NP_001246804.1 gltB 75..1565 CDD:236968
GATase_2 88..504 CDD:278726
Glu_syn_central 543..828 CDD:282720
GltS_FMN 918..1271 CDD:239202
gltB_C 1316..1565 CDD:238482
gltD 1623..2106 CDD:237213 99/456 (22%)
Fer4_8 1645..1756 CDD:302761 12/63 (19%)
NAD_binding_8 1772..>1804 CDD:290186 5/31 (16%)
F20D6.11NP_505112.1 Rieske_AIFL_N 29..118 CDD:239560 7/41 (17%)
Pyr_redox_2 147..443 CDD:369639 81/360 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.