DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9705 and YBX3

DIOPT Version :9

Sequence 1:NP_001261972.1 Gene:CG9705 / 39875 FlyBaseID:FBgn0036661 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_003642.3 Gene:YBX3 / 8531 HGNCID:2428 Length:372 Species:Homo sapiens


Alignment Length:127 Identity:38/127 - (29%)
Similarity:50/127 - (39%) Gaps:34/127 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TEPRTPEKLLAAKP-------PVLHHNSHSPNASLQLP------------SPIITRRTRTASTSA 47
            |.|:.|.:..||.|       ||   .|.:|.|:...|            :|..|.....||.:.
Human    14 TLPQAPTEAAAAAPQDPAPKSPV---GSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLAT 75

  Fly    48 RA----LENPV----VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIE----GEYVPMPGD 97
            .|    .|..|    |.|.||.|:...|:|||..|...||||.|.:.|:    .:|:...||
Human    76 AAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9705NP_001261972.1 CSP_CDS 55..120 CDD:239905 19/47 (40%)
YBX3NP_003642.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 17/70 (24%)
CSD 91..160 CDD:278729 19/47 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..372
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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