DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG9705 and Lin28b

DIOPT Version :9

Sequence 1:	NP_001261972.1	Gene:	CG9705 / 39875	FlyBaseID:	FBgn0036661	Length:	143	Species:	Drosophila melanogaster
Sequence 2:	XP_011241482.1	Gene:	Lin28b / 380669	MGIID:	3584032	Length:	303	Species:	Mus musculus

Alignment Length:	183	Identity:	40/183 - (21%)
Similarity:	60/183 - (32%)	Gaps:	64/183 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 PEKL--LAA-KPPVLHHNSH--------------------SPNASLQLPSPIITRRTR------- 41
            ||||  ||. :|.|||...|                    :|   |.:|..:...:::
Mouse    44 PEKLPGLAEDEPQVLHGTGHCKWFNVRMGFGFISMISREGNP---LDIPVDVFVHQSKLFMEGFR 105

  Fly    42 ----------TASTSARALENPVVTG-----MVKSFSRTKGHGFITPNAGGE---------DVFC 82
                      |...|.:.||:..|||     .:.|..|.||.........|:         |...
Mouse   106 SLKEGEPVEFTFKKSPKGLESIRVTGPGGSPCLGSERRPKGKTLQKRKPKGDRWRRQDLLMDQMW 170

  Fly    83 HVSDIEGEYVP----MPGDEVKYRLCAIPPKYEK-HQAVHVQISHLTPEVHHK 130
            .|.:.|...:|    ..|.:...:.|::||:.:| |..  ..|.|:.....||
Mouse   171 TVREEESRMIPRCYNCGGLDHHAKECSLPPQPKKCHYC--QSIMHMVANCPHK 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9705	NP_001261972.1	CSP_CDS	55..120	CDD:239905	18/83 (22%)
Lin28b	XP_011241482.1	CSP_CDS	61..131	CDD:239905	9/72 (13%)
Lin28b	XP_011241482.1	PTZ00368	<183..219	CDD:173561	8/37 (22%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1278
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810