Protein Alignment CG9705 and lin-28

DIOPT Version :9

• Sequence 1: NP_001261972.1
• Gene: CG9705 / 39875
• FlyBaseID: FBgn0036661
• Length: 143
• Species: Drosophila melanogaster
• Sequence 2: NP_001021085.1
• Gene: lin-28 / 172626
• WormBaseID: WBGene00003014
• Length: 227
• Species: Caenorhabditis elegans
• Alignment Length: 87
• Identity: 26/87 - (29%)
• Similarity: 40/87 - (45%)
• Gaps: 14/87 - (16%)

  Fly    20 HNSHSPNASLQ--LPSPI---ITRRTRTASTSARALENPVVTGMVKSFSRTKGHGFITPNAGGED 79
            :|.:||...::  ||..:   :|...|..|........|...|..|.|:.:||:||:..:..|||
 Worm    13 NNRYSPQDEVEDRLPDVVDNRLTENMRVPSFERLPSPTPRYFGSCKWFNVSKGYGFVIDDITGED 77

  Fly    80 VFCHVSDI---------EGEYV 92
            :|.|.|::         |||.|
 Worm    78 LFVHQSNLNMQGFRSLDEGERV 99

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9705	NP_001261972.1	CSP_CDS	55..120	CDD:239905	17/47 (36%)
lin-28	NP_001021085.1	CSD	55..119	CDD:278729	17/45 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910