DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus302 and Rfwd3

DIOPT Version :10

Sequence 1:NP_648919.1 Gene:mus302 / 39874 FlyBaseID:FBgn0287696 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_666330.2 Gene:Rfwd3 / 234736 MGIID:2384584 Length:774 Species:Mus musculus


Alignment Length:705 Identity:187/705 - (26%)
Similarity:295/705 - (41%) Gaps:132/705 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TEALDP-----EVYADETSTDDSSGDDEVILNPVEGLQPAVEIDE-------------------- 44
            ||.:.|     ||....||.:.|.|..   .||..|...:|.::.                    
Mouse    93 TEEVQPSEENMEVVNPGTSEEPSQGSG---ANPTAGAARSVSMNNFISGLQRLHNMLELLRPPPA 154

  Fly    45 ----------------QRDQPGENAEPEQPR-VP--PLILV------DPPHLPSPPRNSRRN--- 81
                            .|.:.||:...:..| ||  ||...      .|..||:...:..||   
Mouse   155 DHSVGPIRTRRRMAPILRARAGESQRQDNGRYVPHTPLYAYFQVSRSQPYPLPAAHDSETRNPPS 219

  Fly    82 --------QGEEQE-VISLETPSP--PKK------RKRLSAAADKSLKKSPEGKPIVVD--DEDD 127
                    ..|::| |:..|.|..  |::      ::..|...|.::.|....||.::.  ::::
Mouse   220 GTDSDSDGSAEDEEVVVQAEEPEANIPEQGVIATDQEATSVTGDDAVPKESPQKPNMLSAMEDEE 284

  Fly   128 GMTCPICLDSWEMSGEHRLVSLRCGHLFGESCIRRWLNESHRQSSVKVCPQCKTKATFRDIRHLY 192
            |.||.|||:.|..:|:||:.:||||||||..||.:||....|:     ||||..||...||..:|
Mouse   285 GETCTICLEQWTNAGDHRISALRCGHLFGFRCISKWLKGQTRK-----CPQCNKKAKHSDIVVIY 344

  Fly   193 AKRIQMLDTDIREQLEAERRRTHTL----TTELATAKLANTLTTEKLILLQKDYERLKELV---- 249
            |:.::.|||..:|:::::......|    ..|.|..:|...:..:|...|....:.|::.|    
Mouse   345 ARSLRALDTSEQERMKSDLLNEQMLRKQAELESAQCRLQLQVLIDKCTKLNSRVQDLEKFVVRHQ 409

  Fly   250 ----------RAGGGRGAFGGDASGQKSIQQLATYRLYMEKNFEITRDPGCRVLLYSAKHSMLVA 304
                      :|..|:......:.|:.|          .||.|.|::...||:|.|....|.|||
Mouse   410 NSAAQQCSRSKALCGKCLSSSQSPGKYS----------SEKTFTISQTGKCRILAYCDGLSCLVA 464

  Fly   305 SQKSAQNLF-PGYGVRFIDPPTFKPLQFLHTSALLIRDIAF-SDSQHLLTVASRELKIKIFDIRT 367
            ||.|.|..| ||:||:.:.....|..|::......||.::| |.|:.||..||.:..||:..:.|
Mouse   465 SQPSPQASFLPGFGVKMLSTANMKSSQYIPMHNKQIRGLSFSSQSKGLLLSASLDCTIKLTSLET 529

  Fly   368 RLCSSMFTAHDKMLWSC--ALDRNEREHFLYGGDLRGGVYIYDLRFPENILCEFQAEVNLSPVIH 430
            ......:.. .:.:|||  .||.|   :::|.|...|.:.|||||.....:.|...:....|::.
Mouse   530 NTVVQTYNT-GRPVWSCCWCLDEN---NYVYAGLASGSILIYDLRNTNTYIQELVPQKARCPLVS 590

  Fly   431 IA--PVQPNKIFTSGGFLVCQLTALTFYEYAAASD-TAVPTRLNVE-GPFLSMQYDAVQDTVLIS 491
            ::  |......|..||.|...|...:|:|  ..|| :..|..|::| |.|:..|.::.....|::
Mouse   591 LSYLPKAAVAAFPYGGVLAGTLENASFWE--LKSDFSHKPHVLSLEPGGFVDFQTESSTRHCLVT 653

  Fly   492 ARSNPNFPQSRFILGRMD-KID--GTPV---LKVKATIYGSKATPVMTRPTQLAVED---NTLVV 547
            .|.:.:....|.:|..|. |:|  |.||   |.|: |..|.....::|:.......:   |.||.
Mouse   654 YRPDKSHNTVRTVLLEMSYKLDDAGEPVCSCLPVQ-TFLGGPTCKLLTKSAIFQSPENNGNVLVC 717

  Fly   548 GYLQDSKQLMMHDVRREERVQTMPVNEVIYDICPVATQAGSYLAALTDNKCRVYK 602
            ...:.|:..::.:......:|.:...|.:.||||..|...||||.||:....:||
Mouse   718 TGDEASQSTLLWNAGSGLLLQNLKAGEPVLDICPFETNQNSYLATLTEKTVHMYK 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus302NP_648919.1 mRING-C3HGC3_RFWD3 127..192 CDD:438114 31/64 (48%)
WD40 <293..445 CDD:475233 48/157 (31%)
WD40 repeat 339..375 CDD:293791 12/36 (33%)
Rfwd3NP_666330.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..126 11/35 (31%)
PRK07764 <35..242 CDD:236090 30/151 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..281 16/77 (21%)
mRING-C3HGC3_RFWD3 284..344 CDD:438114 31/64 (48%)
WD40 451..>571 CDD:475233 43/123 (35%)
WD 1 493..535 12/41 (29%)
WD40 repeat 501..537 CDD:293791 11/35 (31%)
WD 2 536..568 10/35 (29%)
WD40 repeat 542..582 CDD:293791 15/42 (36%)
WD 3 583..628 11/46 (24%)
WD40 repeat 590..644 CDD:293791 16/55 (29%)
WD40 repeat 701..741 CDD:293791 5/39 (13%)

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