DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrt and PCME

DIOPT Version :10

Sequence 1:NP_476798.1 Gene:Nrt / 39873 FlyBaseID:FBgn0004108 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_197090.2 Gene:PCME / 831443 AraportID:AT5G15860 Length:427 Species:Arabidopsis thaliana


Alignment Length:138 Identity:37/138 - (26%)
Similarity:56/138 - (40%) Gaps:24/138 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 GDEDCLYLDVVTPHVRYNNP--LPVVVLI--GAESLAGPSPGILRPSARYSRSHDVIFVRPNFRL 493
            ||:....||:..|.   ||.  .||||.:  ||..:...:.|.|.......|  |:|....::| 
plant   136 GDQPRNRLDLYLPS---NNDGLKPVVVFVTGGAWIIGYKAWGSLLGMQLAER--DIIVACLDYR- 194

  Fly   494 GVFGFLALDALTKEAHPPTSGNYALTDIIAVLNWIKLNIVHFGGDPQSVTLLGHRAGATLVTLLV 558
                          ..|..:.:..:||....::::..||..|||||..:.|:|..|||.:....:
plant   195 --------------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMGQSAGAHIAACAL 245

  Fly   559 NSQKVKGL 566
            ..|..|.|
plant   246 LEQATKEL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrtNP_476798.1 PTZ00121 <3..>222 CDD:173412
alpha/beta hydrolases 362..832 CDD:473884 37/138 (27%)
PCMENP_197090.2 Aes 144..394 CDD:440422 34/130 (26%)
Blue background indicates that the domain is not in the aligned region.

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