DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrt and Jhedup

DIOPT Version :10

Sequence 1:NP_476798.1 Gene:Nrt / 39873 FlyBaseID:FBgn0004108 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_611085.2 Gene:Jhedup / 36779 FlyBaseID:FBgn0034076 Length:559 Species:Drosophila melanogaster


Alignment Length:457 Identity:128/457 - (28%)
Similarity:190/457 - (41%) Gaps:89/457 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 FGILLFVLLLGVIGYVLTHETLTSPPLREGRYIMAVTGC--GPVEGVKEDGAF-AFRGIPYAKPP 390
            ||:||||.:  .:|..|.             ..:...||  |.:....:.|.| ||.|||:|:||
  Fly     6 FGVLLFVAV--AVGDSLD-------------VCLEDMGCMRGTLMPGYQSGEFEAFMGIPFAQPP 55

  Fly   391 VDRLRWK-PAELIDDINMCWNDTLQTHNSSVVCTQR---LGNGTTVGDEDCLYLDVVTPHVRYNN 451
            |..||.| |..     |..|...|....:...|.||   ......:|.||||||:|..|..|..:
  Fly    56 VGPLRLKNPVP-----NEPWEGVLDAGAAKDSCIQRSYFAKEWGLMGVEDCLYLNVYRPKNRAED 115

  Fly   452 PLPVVVLI-GAESLAGPSPGILRPSARYSRSHDVIFVRPNFRLGVFGFLALDALTKEAHPPTSGN 515
            .|||:|.| |....:|.:..:.........::.|:.|..|:|||.||||:    |.:.|.|  ||
  Fly   116 KLPVMVYIHGGGFFSGSAHPMASGPEYLMDTNKVVMVTMNYRLGPFGFLS----TGDEHMP--GN 174

  Fly   516 YALTDIIAVLNWIKLNIVHFGGDPQSVTLLGHRAGATLVTLLVNSQKVKGLYTRAWASSGSAILP 580
            :...|....|.||:.:|..|||||:.||:|||.||.....|.:.|...|||:..:.:.:|:..|.
  Fly   175 FGFKDQRLALQWIQKHIATFGGDPKKVTVLGHSAGGISAHLHMISPNSKGLFQNSMSLTGTMFLS 239

  Fly   581 G-----KPLSESGKQNEQL----MATLECADI-QCLREASSERLWAATPD--TWLHFP------- 626
            .     .|||::.:..::|    ..:|...|: :.||....::|..:...  .|.:.|       
  Fly   240 AMKILKDPLSQARRLGKELAIDQAESLSSQDLAEALRNVCPKKLLVSVDSLKVWDNMPHLTTLPV 304

  Fly   627 VDLPQPQEANASGSRHEWLVLDGDVVFEHPSDTWKREQANDKP-VLVMGATAHEAH--------T 682
            ::.|.|               |..:| |.|.|..:..:.|..| :|.:.:.|.|..        .
  Fly   305 LEAPSP---------------DAFLV-EDPLDAHRAGRINQMPWILSLSSRAGEGSLFIMRAFIN 353

  Fly   683 EKLR-ELHANWTREEVRAYLENSQIGA-LGLTDEVIEKY-------NASSYASLVSIISDIRSVC 738
            .||| |.:.|:.  |..|.|.|...|. :.:..|:::.|       |..:...|..|..|.....
  Fly   354 PKLRAEFNENFL--EHMALLLNLPEGTPVQMVSEILDAYDFKGDSLNNDTMLKLAEISGDFNFYY 416

  Fly   739 PL 740
            |:
  Fly   417 PI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrtNP_476798.1 PTZ00121 <3..>222 CDD:173412
alpha/beta hydrolases 362..832 CDD:473884 120/424 (28%)
JhedupNP_611085.2 alpha/beta hydrolases 31..508 CDD:473884 118/417 (28%)
Blue background indicates that the domain is not in the aligned region.

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