DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrt and SPOM_SPCC417.12

DIOPT Version :10

Sequence 1:NP_476798.1 Gene:Nrt / 39873 FlyBaseID:FBgn0004108 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_588289.2 Gene:SPOM_SPCC417.12 / 2539430 PomBaseID:SPCC417.12 Length:539 Species:Schizosaccharomyces pombe


Alignment Length:493 Identity:125/493 - (25%)
Similarity:194/493 - (39%) Gaps:136/493 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 VTGCGPVEG---VKEDG---AFAFRGIPYAKPPVDRLRW-KPAELID--DINMCWNDTLQTHNSS 419
            :.|.|.:.|   :.|:|   ...|.||.||||||.:||| :|..|.|  |.:..:|      ...
pombe    17 IPGMGVLHGLTVLDENGKEKCHRFTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYN------QFK 75

  Fly   420 VVCTQ--------RLGNGTTVGDEDCLYLDVVTP---------------H---VRYNNPLPVVVL 458
            .:|.|        ::.|.....|||||:|::..|               |   ::..|||.....
pombe    76 TICPQPFYNNRKNQVRNPDFKYDEDCLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQC 140

  Fly   459 IGAESLAGPSPGILRPSARYSRSHDVIFVRPNFRLGVFGFLALDALTKEAHPPTSGNYALTDIIA 523
            ...:..|..||      |::      |.|.|..||.:|||||...|.:|  .|.|.|:...|...
pombe   141 DPQDLQADGSP------AKF------ILVSPGHRLNLFGFLAGKELLEE--DPKSSNFGFWDQRL 191

  Fly   524 VLNWIKLNIVHFGGDPQSVTLLGHRAG--ATLVTLLVNS--QKVKGLYTRA-WASSGSAILPGKP 583
            .|.|...:|..|||:.:::.:.|..||  :.|..|:..:  .:...:..|| ..|:|.::.| |.
pombe   192 GLEWTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQIIKRALLLSNGLSVQP-KS 255

  Fly   584 LSESGKQNEQLM----ATLECADIQCLREASSERLWAATPDTWLHFPVDLP-QPQEANASGSR-H 642
            :.||..|..:|.    ..||.:..:.|     |:|.|            :| |....|....| |
pombe   256 VEESQIQFNELAQKFGIPLELSSAEKL-----EKLRA------------IPFQDLADNILNLRLH 303

  Fly   643 EW-LVLDGDVVFEHPSDTWK-----------REQANDKPVLVMGATAHE----AHT------EKL 685
            .: .|.|||  |.:| :|:|           |:...:   |::|...:|    |:|      |.|
pombe   304 TFRAVTDGD--FVNP-NTFKDIYDGTFGKRIRDSGRE---LIIGEVNNEHSIYANTNPPKSKEDL 362

  Fly   686 RELHANWTREEVRAYLENSQIGALGLTDEVIEKYNASSYASLVSIISDIR--SVCPLLTNARQQP 748
            .....|:..|:|...|.........:.||  ::|.|:..|...||:||::  :...:|.|...:.
pombe   363 FNQVNNYYPEKVTKALLELYPKVPDMEDE--KEYLAAIKALFGSIVSDMQVYASTRVLINGLVKG 425

  Fly   749 SVP------FYVVTQGEGPDQLATVDADVQAILGRYEP 780
            .||      :.:..:|:              ...:|||
pombe   426 GVPLEKIYRYRIAFRGK--------------FFDKYEP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrtNP_476798.1 PTZ00121 <3..>222 CDD:173412
alpha/beta hydrolases 362..832 CDD:473884 125/493 (25%)
SPOM_SPCC417.12NP_588289.2 alpha/beta hydrolases 27..466 CDD:473884 122/483 (25%)
Blue background indicates that the domain is not in the aligned region.

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