DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrt and tg

DIOPT Version :9

Sequence 1:NP_001189121.1 Gene:Nrt / 39873 FlyBaseID:FBgn0004108 Length:846 Species:Drosophila melanogaster
Sequence 2:NP_001316486.1 Gene:tg / 100492021 XenbaseID:XB-GENE-6073495 Length:2780 Species:Xenopus tropicalis


Alignment Length:536 Identity:134/536 - (25%)
Similarity:214/536 - (39%) Gaps:118/536 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 FRGIPYAKPPVDRLRWKPAELIDDINMCWNDTLQTHNSSVVCTQRLGNG----TTVGDEDCLYLD 441
            |.|||||.|||...|:.|.:.::     |........|...|.|. |:|    ::|| ||||||:
 Frog  2244 FLGIPYAAPPVGVYRFSPPQPVN-----WTGEWNATYSRASCLQP-GDGKAQYSSVG-EDCLYLN 2301

  Fly   442 VVTPHVRYNNPLPVVVLIGAESLAGPSPGILRPSARYSRSHDVIFVRPNFRLGVFGFLALDALTK 506
            |..|.....|...::....:.|............:..:...:::.|...:|:||||||   :.|.
 Frog  2302 VFVPQHAGTNAAVLLYFHNSPSDYSEKGQTFIDGSYLAAIGNIVVVTAGYRVGVFGFL---SNTG 2363

  Fly   507 EAHPPTSGNYALTDIIAVLNWIKLNIVHFGGDPQSVTLLGHRAGATLVTL--LVNSQKVKGLYTR 569
            |..|  |||:.|.|.:|.|.|::.||.:|||||..:::...||||.:.::  :|...|   |:.|
 Frog  2364 ETAP--SGNWGLLDQVAALKWVQENIAYFGGDPTLISIAADRAGADISSIHTIVPEGK---LFRR 2423

  Fly   570 AWASSGSAILPGKPLSE--SGKQNEQLMATLECAD-----IQCLREASSERLWAATPDTWLHFPV 627
            |....|||..|....||  :.:|.|.|.|.:||:.     :.|||...:..|.||          
 Frog  2424 ALLMGGSAFSPMMVTSEKRAKEQVEFLAAEVECSSSNKDLLTCLRGVDAGALNAA---------- 2478

  Fly   628 DLPQPQEANASGSRHEW-LVLDGDVVFEHPSDTWKREQANDKPVLVMGATAHE---AHTEKLREL 688
               |.:.....|....| .::|...|.|.||...|:::. .|..|::|::..:   :..:.::..
 Frog  2479 ---QTKLLAQRGPFQTWGPIVDKLYVKETPSRMLKQKKF-QKIDLLIGSSELDGLISRAKAIKRF 2539

  Fly   689 HANWTREEVRAY---LENSQIG--ALGLTDEVIEKYNASSYAS---------LVSIISDIRSVCP 739
            .....|.:..|:   |:||..|  |..|..|....:.:..::|         |.....|....||
 Frog  2540 EETQGRVDKTAFYQALQNSLGGVEANSLLQEAAVWFYSLEHSSDDYTGFSKALEKATRDHFIACP 2604

  Fly   740 LLTNAR-----QQPSVPFYVVTQGEGPDQLA------TVDADVQAILGRYEP-HTVEQRRFVSAM 792
            ::..|:     .:.::..|.|     ||.|:      .:..||....|.  | ||..:.:|.|..
 Frog  2605 VIKMAKHWAENSKGNIYLYHV-----PDTLSQSSSGLDLPEDVIRAFGL--PFHTNYKNQFSSEE 2662

  Fly   793 QQL------------------FYY---------------YVSHGTVQSFVQNRRVINVGQDAQPE 824
            |.|                  |.|               |::|....::.:....:...|..:..
 Frog  2663 QILSLKIMQYVSNFVRTGNPNFPYKFLRRISKELPAWPMYLAHSNGTNYKEFSSSLTNNQGLKNS 2727

  Fly   825 EDYLPCNYWISKDIVP 840
            |    |::|  .|.:|
 Frog  2728 E----CSFW--NDYIP 2737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrtNP_001189121.1 Abhydrolase 362..832 CDD:304388 131/526 (25%)
tgNP_001316486.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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