DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp73D and AT1G71370

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_177293.1 Gene:AT1G71370 / 843478 AraportID:AT1G71370 Length:558 Species:Arabidopsis thaliana


Alignment Length:658 Identity:152/658 - (23%)
Similarity:253/658 - (38%) Gaps:194/658 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 KKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQKQVIP 169
            |.:...||.:         ..|:|    |.||.|          .:||.:...:...|||.:.||
plant     7 KTITKALPRF---------SELKP----PLSEDI----------IEALDRSGFEVCTPVQAETIP 48

  Fly   170 WILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC-----KVRALVVLPVAELAL 229
            ::. :|        :|:.|.|.|||||||||.:|.::::.:....     :|..:::.|..||:.
plant    49 FLC-SH--------KDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSA 104

  Fly   230 QVYRVISELCSK-TELEVCLLSKQHKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKG 293
            |:::|.....|. ..:...||....::|.:...|.|:       .|::::.|||||.|.:...:.
plant   105 QIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEE-------GANLLIGTPGRLSDMMKRMEF 162

  Fly   294 FCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLL 358
            ...::|:.|::|||||::|..||..:.::.|.:.                        ||....|
plant   163 LDFRNLEILILDEADRLLDMGFQKQVNYIISRLP------------------------KQRRTGL 203

  Fly   359 FSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATE--EGADTEALTDPGQFVGRYTTPAELTE 421
            ||||.:|   .:.|            |....|::|.|  .||::::.|..|.:.           
plant   204 FSATQTQ---AVAD------------LAKAGLRNAMEVISGAESKSKTSSGLYC----------- 242

  Fly   422 QYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKV 486
            :|...|...|...:..|:.:.|.|:.:.|..:.........||..:....|.......|.:..|.
plant   243 EYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKG 307

  Fly   487 RNERLRDFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTV 551
            |:..|..|.......|:|:|..|||:|:..:|.|:.|:.|:....:|||||||||..|:|.|:..
plant   308 RDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVF 372

  Fly   552 L--TEQDMTLFKKI-------------LSDA---------------NKGLG---------EEIHV 577
            |  .|.|...|.:|             .||.               .|||.         :|.|.
plant   373 LMPKETDYVEFMRIRRVPLQERKCSENASDVIPIIRSLAIKDRAVLEKGLQAFVSFVRAYKEHHC 437

  Fly   578 S-----PDIEI------------QHAVEYKE---------ALAGLRSEKVKNKN---QKMAEKNR 613
            |     ..:||            .:..|.|:         .:.|:..|.:|.||   :|..::|.
plant   438 SYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKYKNKSREKQRQQNL 502

  Fly   614 VATKALIHKKQEETATVRPLTLMEKLQIKANEIVQSSKKSSETKNSKTKADKTKYQPKETKKQII 678
            :|.|                   :||        |..|:....|:||...|.:....:  |:::.
plant   503 LARK-------------------DKL--------QQEKRGKRKKSSKEAVDDSNKASR--KRKLT 538

  Fly   679 AKQLKAIE 686
            .:|.:.|:
plant   539 GRQRQTIQ 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 132/555 (24%)
DEAD 162..370 CDD:278688 57/213 (27%)
HELICc 418..551 CDD:238034 38/132 (29%)
AT1G71370NP_177293.1 SrmB 6..500 CDD:223587 138/581 (24%)
DEADc 16..226 CDD:238167 69/287 (24%)
Helicase_C 250..363 CDD:278689 32/112 (29%)
DUF4217 407..461 CDD:290667 8/53 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.