DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp73D and AT1G71280

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_177284.1 Gene:AT1G71280 / 843469 AraportID:AT1G71280 Length:465 Species:Arabidopsis thaliana


Alignment Length:616 Identity:129/616 - (20%)
Similarity:219/616 - (35%) Gaps:209/616 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PNWLAHPTIIEG-----GSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQKQVIPWI 171
            ||     ||||.     ..|:|    |.||.|          .:||.:...:...|||.:.||::
plant     6 PN-----TIIEEAPPRFSELKP----PLSEDI----------IEALDRSGFEVCTPVQAETIPFL 51

  Fly   172 LEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC-----KVRALVVLPVAELALQV 231
            . :|        :|:.|.|.|||||||||.:|.::::.:....     :|..:::.|..||:.|:
plant    52 C-SH--------KDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQI 107

  Fly   232 YRVISEL------CSKTELEVCLLSKQHKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHA 290
            ::|...:      |.:.|.::      :.||:|              .|::::.|||||.|.:..
plant   108 HKVARAVRLDFAKCREVEADM------NTLEEE--------------GANLLIGTPGRLSDMMKR 152

  Fly   291 TKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPH 355
            .:....::|:.|::|||||::|..||..:.::.|.:.                        ||..
plant   153 MEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLP------------------------KQRR 193

  Fly   356 KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELT 420
            ..|||||                                    .|:|:.|        ...|.|.
plant   194 TGLFSAT------------------------------------QTQAVAD--------LAKAGLR 214

  Fly   421 EQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAK 485
            ..|...|...|...:..|:.:.|.|:.:.|..:.........|:..:....|.......|.:..|
plant   215 NPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQK 279

  Fly   486 VRNERLRDFAAGKINGLICSDALARGIDV----------------------ADVDVVLSYETPRH 528
            .|:..|..|.......|:|:|..|||:|:                      |.|..|.:|:  .|
plant   280 GRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYK--EH 342

  Fly   529 ITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDANKGLGEEIHVSPDIEIQHAVEYKEAL 593
            ..:||.        ..||..:..|......|....:|:..:   :.|.:.....:|         
plant   343 QCSYIF--------SWKGLEIGKLAMGYGILSFPYISEVKQ---DRIGIVGFTPVQ--------- 387

  Fly   594 AGLRSEKVKNKN---QKMAEKNRVATKALIHKKQEETATVRPLTLMEKLQIKANEIVQSSKKSSE 655
             |:..|.:|.||   :|..::|.:|.|                   :||        |..|:...
plant   388 -GITFEDIKFKNKSREKQRQQNLLARK-------------------DKL--------QQEKRGKR 424

  Fly   656 TKNSKTKADKTKYQPKETKKQIIAKQLKAIE 686
            .|:||...|.:....:  |:::..:|.:.|:
plant   425 KKSSKEAVDDSNKASR--KRKLTGRQRQTIQ 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 106/515 (21%)
DEAD 162..370 CDD:278688 55/218 (25%)
HELICc 418..551 CDD:238034 31/154 (20%)
AT1G71280NP_177284.1 DEADc 17..217 CDD:238167 68/310 (22%)
DEXDc 32..217 CDD:214692 61/281 (22%)
Helicase_C 223..>314 CDD:278689 19/90 (21%)
DUF4217 314..368 CDD:290667 11/63 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.