DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Dbp73D and AT5G54910

DIOPT Version :9

Sequence 1:	NP_476833.1	Gene:	Dbp73D / 39871	FlyBaseID:	FBgn0004556	Length:	687	Species:	Drosophila melanogaster
Sequence 2:	NP_200302.1	Gene:	AT5G54910 / 835582	AraportID:	AT5G54910	Length:	739	Species:	Arabidopsis thaliana

Alignment Length:	617	Identity:	154/617 - (24%)
Similarity:	259/617 - (41%)	Gaps:	143/617 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   104 KKKVQMQLPNWLAHPTIIEGGSLQP---EEEVPASE---------------AIDQLDYLEKYTCQ 150
            |:.::.|.|:...:|.     ||:|   :.::..||               ...||...:| |.:
plant    26 KQWIESQKPDSGFNPL-----SLRPLPKDSKIGKSEDGKNGTVFSRYAGVRKFAQLPISDK-TKR 84

  Fly   151 ALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQR---- 211
            .||..|...:..||...||     ||    ...|||..:|.|||||||||.|||::.|.:.
plant    85 GLKDAKYVDMTDVQSAAIP-----HA----LCGRDILGAARTGSGKTLAFVIPILEKLHRERWSP 140

  Fly   212 ---VDCKVRALVVLPVAELALQVYRVISELCSKTELEV-CLLSKQHKLEDEQEKLVEQYKGKYYS 272
               |.|    :::.|..|||.|.:.|::::....:... .|:..:..::.|:|::.|.
plant   141 EDGVGC----IIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEM------- 194

  Fly   273 KADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGT 337
              :|:|..||||:.|:..|..|....|:.|::|||||::|:.|:..|           |.::  :
plant   195 --NILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQL-----------DPII--S 244

  Fly   338 QAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGADTEA 402
            |.|           |....||||||   ..:|::||....            |:|........||
plant   245 QLP-----------KHRQTLLFSAT---QTKKVKDLARLS------------LRDPEYISVHAEA 283

  Fly   403 LTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVL 467
            :|         .||..|.:...:..:..|...:::.::.:...|.|.|.::..|   :.||.:.
plant   284 VT---------ATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQ---VKFVHEA- 335

  Fly   468 FQKY--STKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDV-ADVDVVLSYETPRHI 529
            |.|.  ...:..|.|.:|.:.|......|.. :.:.|.|:|.||||:|. ..||.|:..:.|..:
plant   336 FNKLRPGIPLKSLHGKMSQEKRMGVYSQFIE-RQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDV 399

  Fly   530 TTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDANKGLGEEIHVSPDIEIQHAVEYKEALA 594
            .:||||||||||...:|.::..||..:..:.:|:                          :||..
plant   400 ASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKL--------------------------QEAKV 438

  Fly   595 GLRSEKVKNKNQKMAEKNRVATKALIHKKQEETATVRP-LTLMEKLQIKAN-EIVQSSKKSSETK 657
            .::  .:|..|||:.|.:|:....|:.....:....|. :|.:..:..:.: ||...||.|.|..
plant   439 PIK--LIKANNQKLQEVSRLLAALLVKYPDLQGVAQRAFITYLRSIHKRRDKEIFDVSKLSIENF 501

  Fly   658 NSKTKADKT---KYQPKETKKQIIAKQLKAIE 686
            ::......|   ::...:|||:.:.:...|:|
plant   502 SASLGLPMTPRIRFTNLKTKKKGVYESSIAME 533

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Dbp73D	NP_476833.1	PRK11192	149..629	CDD:236877	127/490 (26%)
		DEAD	162..370	CDD:278688	64/215 (30%)
		HELICc	418..551	CDD:238034	38/135 (28%)
AT5G54910	NP_200302.1	SrmB	70..526	CDD:223587	143/559 (26%)
AT5G54910	NP_200302.1	DEADc_DDX10	82..280	CDD:350699	73/258 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D973872at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920