DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and AT5G05450

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_196164.1 Gene:AT5G05450 / 830428 AraportID:AT5G05450 Length:593 Species:Arabidopsis thaliana


Alignment Length:608 Identity:139/608 - (22%)
Similarity:240/608 - (39%) Gaps:152/608 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 QALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDC 214
            :||.|...:...|||...||.:...         :|:.|.|.|||||||||.:|:|::|.:....
plant    29 EALNQSDFEFCTPVQAATIPLLCSY---------KDVAVDAATGSGKTLAFVVPLVEILRRSTSF 84

  Fly   215 -----KVRALVVLPVAELALQVYRVISELCSK-TELEVCLLSKQHKLEDEQEKLVEQYKGKYYSK 273
                 :|..:::.|..||:.|:|.|.....|. ..:...||....:::.:. |::|:      ..
plant    85 PPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADM-KIIEE------EG 142

  Fly   274 ADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQ 338
            .::::.|||||.|.:...:....::|:.|::|||||:::..||..:.::.|.:.           
plant   143 CNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLP----------- 196

  Fly   339 APLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGADTEAL 403
                         ||....|||||.::..|:|....|..|        :.|...|..:...::.|
plant   197 -------------KQRRTGLFSATQTEGVEELAKAGLRNP--------VRVEVRAKSKSESSQQL 240

  Fly   404 TDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLF 468
            |:.       .||:.|..:|...|...|...:..|:.|...|:.:.|..:.........||..:.
plant   241 TNS-------KTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIP 298

  Fly   469 QKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITTYI 533
            ...|..:..:.|::....|::.|..|.......|:|:|..|||:|:..:|.|:.|:.|:....:.
plant   299 ALKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFN 363

  Fly   534 HRVGRTARAGRKGTAVTVLTEQDMTLF------------KKILSDAN------------------ 568
            ||.|||||.||:|.|:..|..::....            :|...||:                  
plant   364 HRAGRTARLGRQGRAIVFLLPKEEAYVEFMRIRRVPLEERKCSEDASDVIPIIRSAAMKDRAVME 428

  Fly   569 KGLG---------EEIHVS-----PDIEI-------------------QHAV--EYKEALAGLRS 598
            |||.         :|.|.|     .|:||                   ||.:  |....:.|::.
plant   429 KGLKAFVSFVRAYKEHHCSFIFRWKDLEIGKLAMGYGLLYLPSMSEVKQHRLSSEGFTPVEGVKF 493

  Fly   599 EKVKNKNQKMAEKNRVATKALIHKKQEETATVRPLTLMEKLQIKANEIVQSSKKSSETKNSKTKA 663
            |::|.|: |..||.|                      .:.||::..:..:..|:..:.|.....|
plant   494 EEIKFKD-KYREKQR----------------------QQNLQVRKEKRQEEKKEKGKRKRVDASA 535

  Fly   664 DKTKYQPKETKKQIIAKQLKAIE 686
            ..   .||:..:::..||.:.|:
plant   536 SN---DPKKASRKLTGKQRQTIQ 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 129/549 (23%)
DEAD 162..370 CDD:278688 56/213 (26%)
HELICc 418..551 CDD:238034 37/132 (28%)
AT5G05450NP_196164.1 SrmB 12..501 CDD:223587 125/527 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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