DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and AT3G18600

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_188490.1 Gene:AT3G18600 / 821391 AraportID:AT3G18600 Length:568 Species:Arabidopsis thaliana


Alignment Length:605 Identity:167/605 - (27%)
Similarity:265/605 - (43%) Gaps:138/605 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LQKLLKKAAKRKR--KHEAIEVVETPILEKETSD--VKESESKEEQV----EEPEKPLEVVQEED 86
            :::|.|:..||.|  |:|..:..|.....:|.:|  .|:||.|.::|    ||.|:.:|.:::  
plant     9 VEELKKRVRKRSRGKKNEQQKAEEKTHTVEENADETQKKSEKKVKKVRGKIEEEEEKVEAMED-- 71

  Fly    87 VPSNEFQVLGGDDSAAKKKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQA 151
                      |:|    :|.:            :|.|      :.:..:...|.|| |.:.|..|
plant    72 ----------GED----EKNI------------VIVG------KGIMTNVTFDSLD-LSEQTSIA 103

  Fly   152 LKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLL-SQRVDCK 215
            :|:|..:.:..:|...|..:||.         :|:..:|.|||||||||.||.|:|| .:|...:
plant   104 IKEMGFQYMTQIQAGSIQPLLEG---------KDVLGAARTGSGKTLAFLIPAVELLFKERFSPR 159

  Fly   216 --VRALVVLPVAELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYKGKYYSKADIVV 278
              ...:|:.|..|||:|...|..||.......|.::...:....|.:::.        |.:::|:
plant   160 NGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA--------SGSNLVI 216

  Fly   279 TTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQAPLCY 343
            .|||||:|||..||.|..|.||.|||||||||::..|:           |..:::|         
plant   217 ATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFE-----------EDMNKIL--------- 261

  Fly   344 AELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATV-LTMPVLKDATEEGADTEALTDPG 407
                ....|.....|||||   ...|::||        |.| ||.||..|           .|.|
plant   262 ----KILPKTRQTALFSAT---QTSKVKDL--------ARVSLTSPVHVD-----------VDDG 300

  Fly   408 QFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYS 472
            :   |..|...|.:.|||...:.:.:.:.:.::|...|:.:.|.::.......|.::|:    ..
plant   301 R---RKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKI----SD 358

  Fly   473 TKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVG 537
            ..||::.|.:....|.:...||...|...|:|:|..|||:|:..||.::.|:.|...|.||||||
plant   359 VDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVG 423

  Fly   538 RTARA-GRKGTAVTVLTEQDMTLFK----------------KILSDANKGLGEEIHVSPDIEIQH 585
            ||||. |.||.|:.||..:::...:                |.||:....|  |..|:.|..:..
plant   424 RTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQSAL--EKCVAKDYNLNK 486

  Fly   586 AVE--YKEALAGLRSEKVKN 603
            ..:  |:..|:...|..:|:
plant   487 LAKDAYRAYLSAYNSHSLKD 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 138/478 (29%)
DEAD 162..370 CDD:278688 66/210 (31%)
HELICc 418..551 CDD:238034 42/133 (32%)
AT3G18600NP_188490.1 SrmB 86..553 CDD:223587 143/494 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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