DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and ddx10

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001096151.1 Gene:ddx10 / 613047 XenbaseID:XB-GENE-985914 Length:852 Species:Xenopus tropicalis


Alignment Length:644 Identity:163/644 - (25%)
Similarity:276/644 - (42%) Gaps:136/644 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 EEQVEEPEKPLEVVQEEDVPSNEFQVLGGDDSAAKKK----KVQMQLPNWLAHP---TIIEGGSL 126
            |...:|.:|||  :...:.|...|:......|..|:|    :.|.:.|.|....   |.:|    
 Frog     3 EPSQKETKKPL--INSRNDPVKNFEKWKKKYSKKKEKCKSHRKQNKKPEWQVEKETITRLE---- 61

  Fly   127 QPEEEVPASEAIDQLDY-LEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSA 190
            |...|:..||.:...|: |.|.|.:.|.:.:.:....:|||.|...|:.         :|:..:|
 Frog    62 QRYSEINTSEIVKFSDFPLSKKTLRGLVEGQYRLPTEIQKQTIGLALQG---------KDVLGAA 117

  Fly   191 PTGSGKTLAFAIPIVQLLSQR---VDCKVRALVVLPVAELALQVYRVISELCSKTELEVCLLSKQ 252
            .|||||||||.||.::.|.::   .|..:..|::.|..|||.|.:.|:.::....|....|:...
 Frog   118 KTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQTFEVLRKVGRNHEFSAGLVIGG 182

  Fly   253 HKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQN 317
            ..|:.|...:         .:.:|::.|||||:.|:..|..|...:|:.||:||||||:|..|  
 Frog   183 KDLKQETACI---------HRTNILICTPGRLLQHMDETSTFHASNLQMLVLDEADRILDMGF-- 236

  Fly   318 WLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFA 382
                        .|.:.|          :..:..|:...||||||.::..:.|..|         
 Frog   237 ------------ADTMNA----------IVENLPKKRQTLLFSATQTKSVKDLARL--------- 270

  Fly   383 TVLTMPVLKDATEEGADTEALTDPGQFV-----GRYTTPAELTEQYCVTELRLKPLTVFALVEKY 442
                               :|.|| ::|     .:::|||.|.:.|.|.||:.|...:::.:..:
 Frog   271 -------------------SLKDP-EYVWVHENAKFSTPATLEQNYVVCELQQKINLLYSFIRNH 315

  Fly   443 KWKRFLCFTNSSDQATRLTFVLKVLFQKY-----STKVSELSGNLSAKVRNERLRDFAAGKINGL 502
            ..|:.:.|.:|..:       ::.||:.:     ...|..|.|......|.|...||...|...|
 Frog   316 LKKKSIVFFSSCKE-------VQYLFRAFCRLRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVL 373

  Fly   503 ICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMT-LFKKILSD 566
            ..:|..|||:|...|:.||..:.|....|||||||||||....|.|:.||...::. :||::  :
 Frog   374 FATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQL--E 436

  Fly   567 ANKGLGEEIHVSPD--IEIQHAVEYKEALAGLRSEKVKNKNQKMAEKNRVA-TKALIHKKQEETA 628
            ..|....||.::|:  :::|..:|     |.|..|:   ..::.|::..|: .:::...|.:|..
 Frog   437 EKKVPINEIKINPEKLMDVQGRLE-----AFLAQEQ---DLKETAQRCFVSYLRSVYLMKNKEVF 493

  Fly   629 TVRPLTLMEKLQ-------------IKANEIVQSSKKSSETKNSKTKADKTKYQPKETK 674
            .|..|.|.:..|             :||    |:::.:|.:|:....|...:.:..::|
 Frog   494 DVFKLPLTQYAQSLGLAVAPRVRFLLKA----QNAQSTSVSKDDPGTASDQEIEAFKSK 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 129/496 (26%)
DEAD 162..370 CDD:278688 60/210 (29%)
HELICc 418..551 CDD:238034 42/137 (31%)
ddx10NP_001096151.1 SrmB 52..564 CDD:223587 150/593 (25%)
60KD_IMP <704..798 CDD:321001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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