DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and ddx10

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_001922220.1 Gene:ddx10 / 569118 ZFINID:ZDB-GENE-071022-2 Length:864 Species:Danio rerio


Alignment Length:727 Identity:172/727 - (23%)
Similarity:280/727 - (38%) Gaps:231/727 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KEQKDGAQGTNNEDEILQKLLKKAAKRKRKHEAIEVVETPILEKETSDVKESESKEEQVEEPEKP 78
            |:.|:....|::..:..:|..||.||.|.|                  ||.|:..:.:..:.|  
Zfish     4 KKVKEKTNITDDPVKNFEKWKKKYAKTKTK------------------VKRSQKSKVKKRDWE-- 48

  Fly    79 LEVVQEEDVPSNEFQVLGGDDSAAKKKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDY 143
               |:.|::                ||.|...                   .|:...||:...|:
Zfish    49 ---VERENI----------------KKLVDKY-------------------SEINPKEAVKFSDF 75

  Fly   144 -LEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQL 207
             |.|.|.:.|.:.:.::...:|:|.|.:.|:.         ||:..:|.|||||||||.||:::.
Zfish    76 PLSKKTLKGLLEAQYRQPTEIQRQTIGFALQG---------RDVLGAAKTGSGKTLAFLIPVLEC 131

  Fly   208 LSQR----VDCKVRALVVLPVAELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYKG 268
            |.:.    :| .:.||::.|..|||.|.:.|:.::....|....|:.....|:||.||:      
Zfish   132 LYREQWTAMD-GLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKDESEKI------ 189

  Fly   269 KYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQL 333
               .:.:|::.|||||:.|:..|..|....|..||:||||||:|..|              .|.|
Zfish   190 ---HRTNIIICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGF--------------ADTL 237

  Fly   334 LAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGA 398
            .|          :..:..|....||||||.::..:.|..|                         
Zfish   238 NA----------IVENLPKSRQTLLFSATQTRSVKDLARL------------------------- 267

  Fly   399 DTEALTDPGQFV-----GRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQAT 458
               :|.|| ::|     .:::|||.|.:.|.|.||..|...:::.:..:..|:.:.|.....:  
Zfish   268 ---SLKDP-EYVWVHEQAKFSTPATLEQNYVVCELHQKVNMLYSFLRSHLQKKIIVFFACCKE-- 326

  Fly   459 RLTFVLKVLFQKY-----STKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVD 518
                 ::.||:.:     ...|..|.|......|.|...||.......|..:|..|||:|...|:
Zfish   327 -----VQYLFRIFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKTSAVLFATDIAARGLDFPAVN 386

  Fly   519 VVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILSDANKGLGEEIHVS--PDI 581
            .||.::.|....|||||||||||....|.|:.||           |....||:..::...  |..
Zfish   387 WVLQFDCPEDANTYIHRVGRTARYKEGGEALLVL-----------LPSEEKGMISQLQEKKVPIN 440

  Fly   582 EIQHAVEYKEALAGLRSEKVKNKNQKMAEKNRVATKALI--HKKQEETAT------VRPLTLMEK 638
            :||           :..||:.:..||:        :|.:  .|:|:|.|.      :|.:.||:.
Zfish   441 KIQ-----------VNPEKLMSVQQKL--------EAFLAQEKEQKERAQRCFVSYLRSVYLMKN 486

  Fly   639 ------LQIKANEI-----------------VQSSKKSSETKNSKT----------------KAD 664
                  ||:|..|.                 .|..::::...:|.|                :..
Zfish   487 KDVFDVLQLKLPEYAMSLGLAVAPRVRFLLKAQQQRRTAAQDDSSTAGHQSEDELQSFTAQLQQQ 551

  Fly   665 KTKYQPKETKKQ 676
            |||.:|.:::::
Zfish   552 KTKSEPSQSEEE 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 131/497 (26%)
DEAD 162..370 CDD:278688 65/211 (31%)
HELICc 418..551 CDD:238034 40/137 (29%)
ddx10XP_001922220.1 DEADc 72..276 CDD:238167 75/275 (27%)
DEXDc 90..275 CDD:214692 70/256 (27%)
HELICc 289..419 CDD:238034 40/136 (29%)
DUF4217 452..511 CDD:290667 14/66 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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