DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and ddx1

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001184253.1 Gene:ddx1 / 556790 ZFINID:ZDB-GENE-041001-215 Length:740 Species:Danio rerio


Alignment Length:555 Identity:125/555 - (22%)
Similarity:194/555 - (34%) Gaps:191/555 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 RPRD------------ICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLPVAELALQVYRV 234
            :|:|            :..|:.|||.|       :.|:.|.  ....|||::.|..|||.|....
Zfish   250 QPKDGYVALNQAPEGHVVKSSQTGSAK-------VTQVKSS--SNAPRALIIEPSKELAEQTLNN 305

  Fly   235 ISELCSKTELEVCLLSKQHKLED----------EQEKLVEQYKGKYYSKADIVVTTPGRLVDHLH 289
            :::.....:        ..||.:          ||..::|       |..||||.||||| |.|.
Zfish   306 VNQFKKYVD--------NPKLRELLIIGGVAAKEQLNVLE-------SGVDIVVGTPGRL-DDLI 354

  Fly   290 ATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQP 354
            :|....|..::|||:||.|.::.|...:::..:.:.:.:.|                  |.||:.
Zfish   355 STGKLDLSQVRFLVLDECDGLLSAGNTDFIMRIYNQIPQVT------------------SDGKRL 401

  Fly   355 HKLLFSATL-SQDPEKLQDLRLFQP-------------RLFATVLTMPV---------------- 389
            ..::.|||| |.|.:||.:..:..|             .:...|:|:..                
Zfish   402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVTVNPKNDKLWERLGKNHIRT 466

  Fly   390 ----LKDATEEGADTEALTDPGQFV--GRYTTPAELTEQYCVTELRLKPLTVFAL-------VEK 441
                .||.|..||::..:......:  |.||..|       :.|.::....:|..       :|:
Zfish   467 DEVHAKDDTRPGANSPEMWSEAIKILKGEYTVRA-------IKEHKMDQAIIFCRTKIDCDNMEQ 524

  Fly   442 Y----------KWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAA 496
            |          |..:|.|..                          |.|:.....|...|..|..
Zfish   525 YFIKQGGGPDKKGHQFSCVC--------------------------LHGDRKPNERKYNLERFKK 563

  Fly   497 GKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVT-VLTEQDMTLF 560
            .::..|||:|..||||||..|..|::...|.....|:||:||..||.|.|.|:: |..|::...:
Zfish   564 QEVKFLICTDVAARGIDVRGVPYVINVTLPDEKENYVHRIGRVGRADRMGLAISLVAMEKEKVWY 628

  Fly   561 ---------------------------KKILSDANKGLGEEI-HVSPDI-----EIQHAVEYKEA 592
                                       |::|||..:.|...| ...|||     |....|.|.:.
Zfish   629 HVCASRGKGCYNTRLKENGGCTIWYNEKELLSDIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQR 693

  Fly   593 LA---GLRSEKV---KNKNQKMAEKNRVATKALIH 621
            .|   ||....|   ....|::|...|.|..:.:|
Zfish   694 RATGGGLYKGHVDILAPTVQELANLEREAQTSFLH 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 125/555 (23%)
DEAD 162..370 CDD:278688 53/210 (25%)
HELICc 418..551 CDD:238034 35/150 (23%)
ddx1NP_001184253.1 SrmB 1..>62 CDD:223587
P-loop_NTPase 4..>70 CDD:304359
SPRY_DDX1 93..245 CDD:293933
DEXDc 238..439 CDD:214692 56/231 (24%)
P-loop_NTPase 266..426 CDD:304359 53/202 (26%)
Helicase_C 493..609 CDD:278689 34/148 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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