DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and ddx20

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_009302268.1 Gene:ddx20 / 556273 ZFINID:ZDB-GENE-030131-202 Length:811 Species:Danio rerio


Alignment Length:559 Identity:133/559 - (23%)
Similarity:224/559 - (40%) Gaps:137/559 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPR---DICVSAPTGSGKTLAF-AIPI 204
            |.|...:.|.....:|..|:|.:.||            ..|   |:.|.|.:|:|||..| .|.:
Zfish    83 LSKPVLEGLSASGFQRPSPIQLKAIP------------LGRCGLDLIVQAKSGTGKTCVFTTIAL 135

  Fly   205 VQLLSQRVDCKVRALVVLPVAELALQVYRVISELCSKTE-LEVCLLSKQHKLEDEQEKLVEQYKG 268
            ..|:.:....:|  ||:.|..|:|:|::.|:..:.|..| ||..:......:..:::.|      
Zfish   136 DSLILENATTQV--LVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHL------ 192

  Fly   269 KYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMD----AVFQ---NWLYHLDSHV 326
               .|..|.:.:||| :..|.......:.|::..|:||||::::    :.||   ||:|      
Zfish   193 ---KKCHIAIGSPGR-IKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIY------ 247

  Fly   327 KETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKL-QDL-RLFQPRLFATVLTMPV 389
                                 :|.......|..|||.   ||.| |.| |..:...|  |...| 
Zfish   248 ---------------------SSLPANKQMLALSATY---PESLAQQLSRYMREPTF--VRLNP- 285

  Fly   390 LKDATEEGADTEALTDPG--------QFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKR 446
                          ||||        :.|..::.|.::.|:        |..::..|..|..:.:
Zfish   286 --------------TDPGLLGLKQYYKIVPSHSLPHKVFEE--------KVQSLLELFSKIPFNQ 328

  Fly   447 FLCFTNSSDQATRLTFVLKVLFQKYSTK---VSELSGNLSAKVRNERLRDFAAGKINGLICSDAL 508
            .|.|:|...:|..|..:|       |:|   ...:||.||...|.|.:......:...||.:|..
Zfish   329 ALVFSNLHTRAQHLADIL-------SSKGLPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLT 386

  Fly   509 ARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLT--EQDMTLFKKILSDANKGL 571
            :||||...|::|::.:.|:...||:||:||..|.|..|.|||...  |::    .|:::.|.|..
Zfish   387 SRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEEE----NKMMAIAQKCS 447

  Fly   572 GEEIH----VSPDIEIQHAVEYKEALAGLRSEKVKNKNQKMAEKNRVATKALIHKKQEETATVRP 632
            .:.:|    :.|.| ::.|.::...:..|...|:.: |.|..:|.:..::.:..|...|:     
Zfish   448 LDLMHLPDPIPPGI-MEEACDHDVIIETLSKPKIPD-NFKPEKKKKAKSEQMKSKPSRES----- 505

  Fly   633 LTLMEKLQIKANEIVQSSKKSS----ETKNSKTKADKTK 667
                 .:.:...|.|...|..|    :|||..:|..:.|
Zfish   506 -----HISVVITESVTGDKSCSRAETKTKNHSSKPGRQK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 122/510 (24%)
DEAD 162..370 CDD:278688 52/219 (24%)
HELICc 418..551 CDD:238034 39/135 (29%)
ddx20XP_009302268.1 SrmB 76..548 CDD:223587 133/559 (24%)
P-loop_NTPase 78..282 CDD:304359 61/254 (24%)
Helicase_C 311..421 CDD:278689 35/124 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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