DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and ddx18

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001003411.1 Gene:ddx18 / 321127 ZFINID:ZDB-GENE-030131-9685 Length:653 Species:Danio rerio


Alignment Length:635 Identity:173/635 - (27%)
Similarity:270/635 - (42%) Gaps:148/635 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LKEQKDGAQGTNNEDEILQKLLKKAAKRKRKHEAIEVVETPILEKETSDVKE-----------SE 66
            ::||:.......||..  ||..||  |:|||.:|..       |..||.||:           |.
Zfish    56 IEEQQQSVSDEVNETS--QKPKKK--KKKRKLDATG-------ESTTSSVKKAKKQSVDTTQASA 109

  Fly    67 SKEEQVEEPEKPLEVVQEEDVPSNEFQVLGGDDSAAKKKKVQMQLPNWLAHPTIIEGGSLQPEEE 131
            .:|||.||..  ||.|:..:..:||.:....:||    .:...|||:.|.       |:.:....
Zfish   110 GEEEQQEEGN--LETVKCPENGNNEKEGSAEEDS----DEDGPQLPSGLT-------GAFEDRSF 161

  Fly   132 VPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGK 196
            ...||.:.:      .|.:.:|:|....:..:|.:.|..:||.         ||:..:|.|||||
Zfish   162 ASLSEVVSE------NTLKGVKEMGFDTMTEIQHKTIRPLLEG---------RDVLAAAKTGSGK 211

  Fly   197 TLAFAIPIVQLLSQRVDCKVR--------ALVVLPVAELALQVYRVISELCSKTELEVCLLSKQH 253
            ||||.||.::|:     .|::        .:|:.|..|||:|.|.|:.||.:.......|:....
Zfish   212 TLAFLIPSIELI-----YKLKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTHHVHTYGLIMGGS 271

  Fly   254 KLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNW 318
            ....|.:||.        :..:|:|.|||||:|||..|.||..|:|:.|:|||||||::..|:..
Zfish   272 NRSAEAQKLA--------NGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEE 328

  Fly   319 LYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFAT 383
            |..:   :|     ||.                |:...:|||||.::..|.|..:.|.:..|:..
Zfish   329 LKQI---IK-----LLP----------------KKRQSMLFSATQTRKVEDLARISLKKEPLYVG 369

  Fly   384 VLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFL 448
            |       |..::.|..|.| :.|..|             |.:|.|.  |.:|..::|.:.|:.:
Zfish   370 V-------DDNKDTATVEGL-EQGYVV-------------CPSEKRF--LLLFTFLKKNRKKKLM 411

  Fly   449 CFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGID 513
            .|. ||..:.:..:   .|.......|..:.|......|......|.......|:|:|..|||:|
Zfish   412 VFF-SSCMSVKFHY---ELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLD 472

  Fly   514 VADVDVVLSYETPRHITTYIHRVGRTARA--GRKGTAVTVLTEQDMTLFKKILSDANKGLGEEIH 576
            :.:||.::.::.|.....||||||||||.  || |.|:.:|..:::. |.:.|..|...|.|   
Zfish   473 IPEVDWIVQFDPPDDPKEYIHRVGRTARGINGR-GHALLILRPEELG-FLRFLKQAKVPLSE--- 532

  Fly   577 VSPDIEIQHAVEYKEALAGLRSEKVKNKNQKMAEKNRVATKALIHKKQEE 626
                      .|:    :..:...::::..|:.|||     ..:||..:|
Zfish   533 ----------FEF----SWTKISDIQSQLDKLIEKN-----YYLHKSAQE 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 134/488 (27%)
DEAD 162..370 CDD:278688 69/215 (32%)
HELICc 418..551 CDD:238034 39/134 (29%)
ddx18NP_001003411.1 SrmB 160..646 CDD:223587 137/507 (27%)
DEADc 161..368 CDD:238167 77/258 (30%)
HELICc 382..511 CDD:238034 42/149 (28%)
DUF4217 543..601 CDD:290667 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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