DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and Ddx18

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001006997.1 Gene:Ddx18 / 308490 RGDID:1549712 Length:674 Species:Rattus norvegicus


Alignment Length:683 Identity:173/683 - (25%)
Similarity:278/683 - (40%) Gaps:184/683 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EILQKLLKK------AAKRKRKHEAIEVVETPILEKETSDVKESESKEEQVEE------------ 74
            ::..|||:|      |..|:|..:..|..:..:.:.|..||.|...|..:.::            
  Rat     3 QLQMKLLRKKIEKRNAKLRQRNLKLQEASDRSLSQPENGDVPEELGKGGKAKKALKHSVTAGSAE 67

  Fly    75 ------PEKPLEVVQEEDVPSNEFQVLGGDDSAA---------KKKKVQMQLPNWL--------- 115
                  ||:.:|..:.:..| .:..:|...::||         ||||.:.::.|..         
  Rat    68 AQSRGVPEETVENAKVKKSP-QKLTILTNGEAAAMPSTDPELKKKKKKKRKIGNDTEPDPKKAKT 131

  Fly   116 --------------AHPTIIEGGSLQPEE--------EVPA-----SEAIDQLDY------LEKY 147
                          ..|   ||...:||:        |||:     :.|.:...:      :.:.
  Rat   132 EEGTEAREEPEGAGEEP---EGAGEEPEDGVKEADDSEVPSLPLGVTGAFEDTSFASLSNLVNEN 193

  Fly   148 TCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRV 212
            |.:|:::|..|.:..:|.:.|..:||.         ||:..:|.|||||||||.||:::|:   |
  Rat   194 TLKAIEEMGFKHMTEIQHKSIRPLLEG---------RDLLAAAKTGSGKTLAFLIPVIELI---V 246

  Fly   213 DCK------VRALVVLPVAELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYKGKYY 271
            ..|      ...|::.|..|||:|.:.|:.||.:.......|:........|.:||:        
  Rat   247 KLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLL-------- 303

  Fly   272 SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLLAG 336
            :..:|||.|||||:||:..|.||..|:|:.|||||||||:|..|       :..:|:....|.|.
  Rat   304 NGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGF-------EEELKQIIKLLPAR 361

  Fly   337 TQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGADTE 401
            .|.                 :|||||.::..|.|..:.|.:..|:..|       |..:|.|..:
  Rat   362 RQT-----------------MLFSATQTRKVEDLARISLKKEPLYVGV-------DDDKEVATVD 402

  Fly   402 ALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKV 466
            .| :.|..|             |.:|.|.  |.:|..::|.:.|:.:.|. ||..:.:..:   .
  Rat   403 GL-EQGYVV-------------CPSEKRF--LLLFTFLKKNRKKKVMVFF-SSCMSVKYHY---E 447

  Fly   467 LFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITT 531
            |.......|..:.|......|......|.......|:|:|..|||:|:.:||.::.|:.|.....
  Rat   448 LLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKE 512

  Fly   532 YIHRVGRTARA--GRKGTAVTVLTEQDMTLFKKILSDANKGLGE-EIHVSPDIEIQHAVEYKEAL 593
            ||||||||||.  || |.|:.:|..:::. |.:.|..:...|.: :...|...:||..:|     
  Rat   513 YIHRVGRTARGLNGR-GHALLILRPEELG-FLRYLKQSKVPLNQFDFSWSKVSDIQSQLE----- 570

  Fly   594 AGLRSEKVKNKNQKMAEKNRVATKALIHKKQEE 626
                         |:.|||     ..:||..:|
  Rat   571 -------------KLIEKN-----YFLHKSAQE 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 138/487 (28%)
DEAD 162..370 CDD:278688 70/213 (33%)
HELICc 418..551 CDD:238034 40/134 (30%)
Ddx18NP_001006997.1 DEADc 183..390 CDD:238167 77/250 (31%)
DEXDc 198..386 CDD:214692 74/231 (32%)
HELICc 404..533 CDD:238034 43/149 (29%)
DUF4217 565..623 CDD:290667 10/44 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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