DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and C24H12.4

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_740966.1 Gene:C24H12.4 / 173432 WormBaseID:WBGene00016073 Length:634 Species:Caenorhabditis elegans


Alignment Length:710 Identity:159/710 - (22%)
Similarity:272/710 - (38%) Gaps:197/710 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KAAKRKRKHEAIEVVETPILEKETSDVKESESKEEQVEEPEKPLEVVQEEDVPSNEFQVLGGDDS 100
            :..|:|||       .....|:|...|||:..|::..::.|..:|:..:            .::.
 Worm     5 EVTKKKRK-------SVKFAEEEPPKVKEAPKKQKAGKKIEVSVELRDK------------NEEK 50

  Fly   101 AAKKKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEA-----IDQLDY-----------LEKYTC 149
            ..:|:|.:|:              ..|.|:.....|:     :|::|:           |::...
 Worm    51 MGRKRKHRMK--------------KSQAEKRQKLMESLVGPQVDEMDFEPEHKTFADFGLDERIL 101

  Fly   150 QALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLL---SQR 211
            :::.::..::...||:.||...||         .::|...|.||||||.||.||:||.|   |:.
 Worm   102 KSIGELGWEKANQVQESVISLALE---------NKNIMGRARTGSGKTGAFLIPLVQKLIAESKT 157

  Fly   212 VDCKV--RALVVLPVAELALQVYRVISELCSK----TELEVCLLSKQHK---LEDEQEKLVEQYK 267
            .|..|  .|:::.|..||..|:|::..:|...    ..:.:|.::::..   |||          
 Worm   158 NDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLED---------- 212

  Fly   268 GKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQ 332
                 ::.:||||||:|:........:| ..:.:||:||||.::...::..:..:.|.:..|.. 
 Worm   213 -----RSHVVVTTPGKLLRMCSLRPEYC-TLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQ- 270

  Fly   333 LLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEG 397
                     |              |:.||||..|...|:       :||   :|.||:.....||
 Worm   271 ---------C--------------LMTSATLKDDMTTLK-------KLF---MTGPVITIKLTEG 302

  Fly   398 ADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWK----RFLCFTNSSDQAT 458
                .|.:..|......|.....|::.:            ||..:|.|    |.:.|.|:.|:..
 Worm   303 ----DLPNSDQLTQYQLTCGSDEERFAI------------LVAMFKLKLIVGRSILFVNTIDRCY 351

  Fly   459 RLTFVLKVLFQKYSTKVSELSGNLSAKVRNE--------------------RLRDFAAG------ 497
            :|..:|:|...|.....|.:..|....|.|:                    :|::..||      
 Worm   352 KLMLILRVFGLKSCILNSAMPANSRCHVINQFNEGSYQIVIASDVSDADGSKLKEEIAGKSDEKP 416

  Fly   498 --------KINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTE 554
                    |.:.|.....::||||...|..|::::.|.....||||||||||...||||::....
 Worm   417 EKDEKKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 481

  Fly   555 QDMTLFKKILSDANKGLGEEIHVSPDIEIQH----AVEYKEALAGLRSEKVKNKNQK--MAEKNR 613
            .:....::|..:.|:.:|.::....:..|:.    .:..:|||:......:|....|  ..|..|
 Worm   482 SERAHLEQIQEEINQQMGRKVLQPYEFRIKELDTFLLRTREALSKCTKGVIKKARLKEIRQELMR 546

  Fly   614 VATKALIHKKQEETATVRPLTLMEKLQIKANEIVQSSKKSSETK-NSKTKADKTKYQPKE 672
            .|.......|.|.          |||      ::|:.......| ||...||.|.|...|
 Worm   547 SANLQTFFAKNER----------EKL------LMQTDCHPVMLKINSPAIADVTSYMVPE 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 126/535 (24%)
DEAD 162..370 CDD:278688 58/219 (26%)
HELICc 418..551 CDD:238034 43/170 (25%)
C24H12.4NP_740966.1 SrmB 46..561 CDD:223587 135/625 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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