DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp73D and ddx55

DIOPT Version :9

Sequence 1:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001120242.1 Gene:ddx55 / 100145293 XenbaseID:XB-GENE-972462 Length:594 Species:Xenopus tropicalis


Alignment Length:602 Identity:150/602 - (24%)
Similarity:246/602 - (40%) Gaps:156/602 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 QALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVD- 213
            |.|.::|...:.|||...||..:         ..:||...|.|||||||||.||::::|.:|.: 
 Frog    22 QTLSELKFTHMTPVQSATIPLFM---------NNKDIAAEAITGSGKTLAFVIPLLEILLKREEK 77

  Fly   214 ---CKVRALVVLPVAELALQVYRVISELCSKTE--LEVCLLSKQHKLEDEQEKLVEQYKGKYYSK 273
               .:|.|:::.|..|||:|:..|:|.......  .::.|:...:.::|..:  .:::.|     
 Frog    78 LKKNQVGAIIITPTRELAVQIDEVLSYFTKHFPQFSQILLIGGSNPVDDVMK--FKEHGG----- 135

  Fly   274 ADIVVTTPGRLVDHL-HATKGFCL----KSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQL 333
             :|:|.|||||.|.. ....|..|    |:|..|::|||||::|..|:                 
 Frog   136 -NIIVATPGRLEDMFRRQADGLDLVSYVKTLDVLILDEADRLLDMGFE----------------- 182

  Fly   334 LAGTQAPLCYAELQASFG---KQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATE 395
                      |.:....|   ||....|||||.:|:.|.|....|..|           ::.|.:
 Frog   183 ----------ASINTILGFLPKQRRTGLFSATQTQELENLVRAGLRNP-----------VRIAVK 226

  Fly   396 EGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRL 460
            |.......|.        .||..|...|.:.:...|...:.|.:::.|.::.|.|.::.......
 Frog   227 EKGVAATCTQ--------KTPIRLQNYYMICKADEKFNKLVAFLQQRKQEKHLVFFSTCACVEYY 283

  Fly   461 TFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKING--LICSDALARGIDVADVDVVLSY 523
            ...|:.|.:  :.||..:.|.:..| ||....:|.  |:|.  |:|:|.:|||||:.:|:.|:.|
 Frog   284 GKALEALLK--NVKVMCIHGKMKHK-RNRIFTEFR--KLNSGILVCTDVMARGIDIPEVNWVVQY 343

  Fly   524 ETPRHITTYIHRVGRTARAGRKGTAVTVLTE-----------------QDMT-------LFKKIL 564
            :.|...:.::||.|||||.|..|:|:..|..                 |:||       |..|: 
 Frog   344 DPPSSASAFVHRCGRTARIGHHGSALVFLLPMEESYVSFLSINQKCPLQEMTELISAVDLLPKL- 407

  Fly   565 SDANKGLGEEIHVSPDIEIQHAVEYKEALA----------------------GL----RSEKVKN 603
                |.:.|......:..::..|.|.:|.|                      ||    |..:::.
 Frog   408 ----KSMAESDRAVFEKGMKAFVSYVQAYAKHECNLIFRVKDLDFSNLARGFGLLRMPRMPELRG 468

  Fly   604 KNQKMAEKNRVATKALIHK-KQEETATVRPLTLMEKLQIKANEIVQSSKKSSETKN---SKTKAD 664
            ||........:.|.::.:| |..|..       .:|:..:..|.::|..:.:..||   ||.||.
 Frog   469 KNFSDFVSTTIDTDSIPYKDKNREKQ-------RQKMLKERREKLESEGRRNFAKNKAWSKQKAR 526

  Fly   665 KTKYQPKETKKQIIAKQ 681
            |.|      ||::..|:
 Frog   527 KDK------KKKVAQKR 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 136/545 (25%)
DEAD 162..370 CDD:278688 64/221 (29%)
HELICc 418..551 CDD:238034 40/134 (30%)
ddx55NP_001120242.1 SrmB 5..519 CDD:223587 141/576 (24%)
DEADc 9..224 CDD:238167 70/256 (27%)
HELICc 252..371 CDD:238034 38/123 (31%)
DUF4217 403..462 CDD:290667 10/63 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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