DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB1 and Pglyrp1

DIOPT Version :10

Sequence 1:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_445825.1 Gene:Pglyrp1 / 84387 RGDID:621429 Length:183 Species:Rattus norvegicus


Alignment Length:185 Identity:64/185 - (34%)
Similarity:105/185 - (56%) Gaps:13/185 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FVAALVL---CCLALSANALQIEPRSSWGAVSARSPSRISGAVDYVIIHHSDNPNGCSTSEQCKR 70
            |.|.|.|   ||.        :.|||.|.|:.:.....:...|.||:|.|:.. :.||:.:.|::
  Rat     8 FPALLGLADSCCF--------VVPRSEWKALPSECSKGLKKPVRYVVISHTAG-SFCSSPDSCEQ 63

  Fly    71 MIKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHS-PNYNRKSIGIVFIGNFERSAP 134
            ..:|:|.....:..:.|:.|||::..||.||||||:.::|.|: |.:|..||||.|:|::....|
  Rat    64 QARNVQLYQMKQLGWCDVAYNFLIGEDGHVYEGRGWTIKGDHTGPIWNPMSIGITFMGDYSHRVP 128

  Fly   135 SAQMLQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWRQ 189
            :.:.|:.|.:|::.....|:|:.||.:.|||..::|..|||.||..|::|.|:|:
  Rat   129 AKRALRAALNLLKCGVSEGFLRSNYEVKGHRDVQSTLSPGDQLYEIIQSWDHYRE 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 48/142 (34%)
Pglyrp1NP_445825.1 PGRP 21..161 CDD:128941 48/140 (34%)

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