DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB1 and pglyrp6

DIOPT Version :10

Sequence 1:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001038687.2 Gene:pglyrp6 / 571817 ZFINID:ZDB-GENE-071227-2 Length:498 Species:Danio rerio


Alignment Length:183 Identity:69/183 - (37%)
Similarity:103/183 - (56%) Gaps:11/183 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FVAALVLCCLALSANALQIEPRSSWGAVS-ARSPSRISGAVDYVIIHHSDNPN-GCSTSEQCKRM 71
            ||....:|        ..|..||.|||.| ..|||.:|..|.|:.|||:..|: .|:|.|||...
Zfish   320 FVHVYAVC--------PNIITRSQWGAASYIGSPSYLSLPVRYLFIHHTYQPSKPCTTFEQCAAE 376

  Fly    72 IKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSA 136
            ::::|..|:....:|||||:|:...||.:|||||:...|:|:..||....|:.|||::..:.|::
Zfish   377 MRSMQRYHQQSNGWSDIGYSFVAGSDGNLYEGRGWNWVGAHTYGYNSIGYGVCFIGDYTSTLPAS 441

  Fly   137 QMLQNAK-DLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWR 188
            ..:...: |....|...|.|..:|:|:||||..||.|||:.||.:|:||..::
Zfish   442 SAMNMVRYDFTYCATNGGRLSKSYSLYGHRQAAATECPGNTLYRQIQTWERYQ 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 55/144 (38%)
pglyrp6NP_001038687.2 PGRP 328..472 CDD:128941 54/143 (38%)

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