DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB1 and pglyrp2

DIOPT Version :10

Sequence 1:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001038631.1 Gene:pglyrp2 / 568634 ZFINID:ZDB-GENE-071227-1 Length:458 Species:Danio rerio


Alignment Length:166 Identity:60/166 - (36%)
Similarity:98/166 - (59%) Gaps:4/166 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IEPRSSWGAVSARSP-SRISGAVDYVIIHHSDNPN-GCSTSEQCKRMIKNIQSDHKGRRNFSDIG 89
            |.||..|||...:.| ..:|..:.::.|||:..|: .|...:.|.:.::.:|..|:....:.|||
Zfish   287 IIPRCIWGAAPPQVPLELLSPPMSFLYIHHTAIPSKPCLNLQTCSQNMRAMQRFHQKDWGWYDIG 351

  Fly    90 YNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQMLQNAK-DLIELAKQRG 153
            |:|:|..||.:|||||:..||:|:...|....|:.|||::....||...::..: .|::.....|
Zfish   352 YSFVVGSDGYIYEGRGWMSQGAHTKGRNNVGYGVAFIGDYSGRLPSTHDMELVRHHLVKCGVNNG 416

  Fly   154 YLKDNYTLFGHRQ-TKATSCPGDALYNEIKTWPHWR 188
            :|::::|:.|||| ...|||||:|||:||.||.|::
Zfish   417 FLQEDFTILGHRQVVVTTSCPGNALYSEITTWMHYK 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 47/143 (33%)
pglyrp2NP_001038631.1 PGRP 285..430 CDD:128941 46/142 (32%)

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