DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB1 and pglyrp5

DIOPT Version :10

Sequence 1:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001037786.1 Gene:pglyrp5 / 553387 ZFINID:ZDB-GENE-050419-71 Length:238 Species:Danio rerio


Alignment Length:200 Identity:62/200 - (31%)
Similarity:98/200 - (49%) Gaps:32/200 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AALVLCCLALSANA------LQIE-------------------------PRSSWGAVSARSPSRI 44
            |.:.:||.:||:.|      :.:|                         .|..|.||..|..:::
Zfish    23 AEVHVCCPSLSSRANKPVSLVMLEHTGNEKFVADMDGHTNTVDINADTVSRRGWDAVQPREMTQM 87

  Fly    45 SGAVDYVIIHHSDNPNGCSTSEQCKRMIKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQ 109
            ......||:||: ....|:...:....:.:||..|...|.|.||||||:::|||.||||||:|:.
Zfish    88 ESPAHTVIVHHT-ALRFCAHPRESVTELAHIQRMHMQERGFDDIGYNFLISGDGTVYEGRGWGIV 151

  Fly   110 GSHSPNYNRKSIGIVFIGNFERSAPSAQMLQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPG 174
            |:|:..:|..|:||.|:||.....||:..|.....|:.:....|:::.|:.|.||:....|:|||
Zfish   152 GAHAKEHNFYSVGIAFMGNLNADLPSSASLSALLRLLHIGVLHGHVRPNFVLLGHKDVAKTACPG 216

  Fly   175 DALYN 179
            :.||:
Zfish   217 ENLYS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 50/166 (30%)
pglyrp5NP_001037786.1 PGRP 68..209 CDD:128941 49/141 (35%)

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