DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB1 and pglyrp1

DIOPT Version :10

Sequence 1:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_012823786.1 Gene:pglyrp1 / 548492 XenbaseID:XB-GENE-491319 Length:214 Species:Xenopus tropicalis


Alignment Length:174 Identity:68/174 - (39%)
Similarity:98/174 - (56%) Gaps:3/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LCCLALSANALQIEPRSSWGAVSARSPSRISGAVDYVIIHHSDNPNGCSTSEQCKRMIKNIQSDH 79
            ||.:|.|...  |..::.||..:|...:.::..|.||||||:...: ||:...|....|:||:.|
 Frog    43 LCAVANSCPT--ILTKAQWGGRAATCRTAMTTPVPYVIIHHTAGAH-CSSQTSCISQAKSIQNYH 104

  Fly    80 KGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQMLQNAKD 144
            .....:.|:||:|:|..||.||||||:...|:|:||||..||||..:|.:....|:.......|:
 Frog   105 MNSNAWCDVGYSFLVGEDGNVYEGRGWNSVGAHAPNYNSNSIGISVMGTYTNINPNTAAQNAVKN 169

  Fly   145 LIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWR 188
            ||.....:||:|..|.|.|||...:|.|||:..||.:||||.::
 Frog   170 LISCGVTKGYIKSTYILKGHRNVGSTECPGNTFYNTVKTWPRFQ 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 54/141 (38%)
pglyrp1XP_012823786.1 PGRP 51..192 CDD:128941 54/143 (38%)

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