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Protein Alignment PGRP-SB1 and PGRP-LA
DIOPT Version :9
Sequence 1: | NP_648917.1 |
Gene: | PGRP-SB1 / 39870 |
FlyBaseID: | FBgn0043578 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_996026.1 |
Gene: | PGRP-LA / 39062 |
FlyBaseID: | FBgn0035975 |
Length: | 368 |
Species: | Drosophila melanogaster |
Alignment Length: | 176 |
Identity: | 48/176 - (27%) |
Similarity: | 77/176 - (43%) |
Gaps: | 23/176 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 NALQIEPRSSWGA--------VSARSPSRISGAVDYVIIHH---SDNPNGCSTSEQCKRMIKNIQ 76
|...:..|..||| :..:.| :.||:|.| ...| |....:|...::.||
Fly 179 NGHLVVDREQWGASKNSHGLTIPLKRP------IPYVLITHIGVQSLP--CDNIYKCSIKMRTIQ 235
Fly 77 SDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQMLQN 141
......:...||..||.|:.:|.:|.|||: ..:..|..:::.|.|:|::.|..|..:.|:.
Fly 236 DSAIAEKGLPDIQSNFYVSEEGNIYVGRGW----DWANTYANQTLAITFMGDYGRFKPGPKQLEG 296
Fly 142 AKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHW 187
.:.|:..|.....:..:|.|....|||.|..||..:|.||:.|||:
Fly 297 VQFLLAHAVANRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB1 | NP_648917.1 |
PGRP |
25..167 |
CDD:128941 |
35/152 (23%) |
PGRP-LA | NP_996026.1 |
PGRP |
181..322 |
CDD:128941 |
35/152 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 3.020 |
|
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