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Protein Alignment PGRP-SB1 and PGRP-SC2
DIOPT Version :9
Sequence 1: | NP_648917.1 |
Gene: | PGRP-SB1 / 39870 |
FlyBaseID: | FBgn0043578 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Alignment Length: | 180 |
Identity: | 74/180 - (41%) |
Similarity: | 111/180 - (61%) |
Gaps: | 4/180 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 ALVLCCLALSANA---LQIEPRSSWGAVSARSPSRISGAVDYVIIHHSDNPNGCSTSEQCKRMIK 73
||:|..:...|.| :.|..:|.||..||.|.:.::..:.|.:|||:.. |.|||...|...::
Fly 5 ALILLAVLFCAQAVLGVTIISKSEWGGRSATSKTSLANYLSYAVIHHTAG-NYCSTKAACITQLQ 68
Fly 74 NIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQM 138
|||:.|.....::||||||::.|||.||||||:.:.|:|:.|:|.|||||.|:||:..:..::..
Fly 69 NIQAYHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQ 133
Fly 139 LQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWR 188
:..||.|:..|..||.:...|.|:||||..:|.|||..::|||:||.:|:
Fly 134 ITAAKGLLSDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNWK 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB1 | NP_648917.1 |
PGRP |
25..167 |
CDD:128941 |
58/141 (41%) |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
58/141 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440241 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
136 |
1.000 |
Inparanoid score |
I4536 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26632 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
7 | 7.000 |
|
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