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Protein Alignment PGRP-SB1 and PGRP-LE
DIOPT Version :9
Sequence 1: | NP_648917.1 |
Gene: | PGRP-SB1 / 39870 |
FlyBaseID: | FBgn0043578 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001245695.1 |
Gene: | PGRP-LE / 32534 |
FlyBaseID: | FBgn0030695 |
Length: | 345 |
Species: | Drosophila melanogaster |
Alignment Length: | 172 |
Identity: | 68/172 - (39%) |
Similarity: | 97/172 - (56%) |
Gaps: | 12/172 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 LSANALQIEPRSSWGAVSAR-SPSRISGAVDYVIIHHSDNPNGCSTSEQCK---RMIKNIQSDHK 80
||| |.|||||.|.... .|..:...|.||:|.|: ...:||:.. |:|:::|..|.
Fly 174 LSA----IIPRSSWLAQKPMDEPLPLQLPVKYVVILHT----ATESSEKRAINVRLIRDMQCFHI 230
Fly 81 GRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQMLQNAKDL 145
..|.::||.|||:|..||.:|||||:...|:|:..|||.|:||.|||.|.:..|:|..|...::|
Fly 231 ESRGWNDIAYNFLVGCDGNIYEGRGWKTVGAHTLGYNRISLGISFIGCFMKELPTADALNMCRNL 295
Fly 146 IELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHW 187
:....:.|::..:|.|..|.|..:|..||..||.||:||||:
Fly 296 LARGVEDGHISTDYRLICHCQCNSTESPGRRLYEEIQTWPHF 337
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB1 | NP_648917.1 |
PGRP |
25..167 |
CDD:128941 |
53/145 (37%) |
PGRP-LE | NP_001245695.1 |
PGRP |
175..317 |
CDD:128941 |
55/149 (37%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440268 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.950 |
|
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