DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB1 and Pglyrp2

DIOPT Version :10

Sequence 1:NP_648917.1 Gene:PGRP-SB1 / 39870 FlyBaseID:FBgn0043578 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001386642.1 Gene:Pglyrp2 / 299567 RGDID:1359183 Length:522 Species:Rattus norvegicus


Alignment Length:166 Identity:67/166 - (40%)
Similarity:101/166 - (60%) Gaps:7/166 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IEPRSSWGAVSAR---SPSRISGAVDYVIIHHSDNP-NGCSTSEQCKRMIKNIQSDHKGRRNFSD 87
            |.||..|||...|   :|.|:...:.||  ||:..| ..|:|.:.|...::::|..|:..|.::|
  Rat   354 IHPRCRWGAAPYRGHPTPLRLPLGLLYV--HHTYVPAPPCTTFQSCAADMRSMQRFHQNVRGWAD 416

  Fly    88 IGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQMLQNAKDLI-ELAKQ 151
            |||:|:|..||.||:|||:...|:|:..||.:..|:.|:||:..|.||...|...:|:: ..|.:
  Rat   417 IGYSFVVGSDGYVYQGRGWHWVGAHTLGYNSRGFGVAFVGNYTGSLPSEAALNTVRDVLPSCAIR 481

  Fly   152 RGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHW 187
            .|.|:.:|.||||||...|.|||:||:|.::||||:
  Rat   482 AGLLRPDYKLFGHRQLGKTDCPGNALFNLLRTWPHF 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB1NP_648917.1 PGRP 25..167 CDD:128941 55/144 (38%)
Pglyrp2NP_001386642.1 PGRP 352..497 CDD:128941 55/144 (38%)

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