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Protein Alignment PGRP-SB1 and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_648917.1 |
Gene: | PGRP-SB1 / 39870 |
FlyBaseID: | FBgn0043578 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 162 |
Identity: | 67/162 - (41%) |
Similarity: | 93/162 - (57%) |
Gaps: | 2/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 IEPRSSWGAVSARSPSRISGAVDYVIIHHSDNPNGCSTSEQCKRMIKNIQSDHKGRRNFSDIGYN 91
|.|||:|.|.....|.....|...:|||.:. ..|:.|..|...:::.||.|...::|.||.|:
Mouse 199 ITPRSAWEARETHCPQMNLPAKFVIIIHTAG--KSCNESADCLVRVRDTQSFHIDNQDFCDIAYH 261
Fly 92 FIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFERSAPSAQMLQNAKDLIELAKQRGYLK 156
|:|..||:||||.|:.::|||:..||..::||.|:|||....|:...|:.|:.||:.|..:|||.
Mouse 262 FLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQSLIQCAVAKGYLT 326
Fly 157 DNYTLFGHRQTKATSCPGDALYNEIKTWPHWR 188
.||.|.||........||.||||.||||||::
Mouse 327 SNYLLMGHSDVSNILSPGQALYNIIKTWPHFK 358
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB1 | NP_648917.1 |
PGRP |
25..167 |
CDD:128941 |
55/139 (40%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
55/139 (40%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167842404 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm44042 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
4 | 3.800 |
|
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