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Protein Alignment PGRP-SB2 and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445825.1 |
Gene: | Pglyrp1 / 84387 |
RGDID: | 621429 |
Length: | 183 |
Species: | Rattus norvegicus |
Alignment Length: | 141 |
Identity: | 52/141 - (36%) |
Similarity: | 75/141 - (53%) |
Gaps: | 12/141 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LCGLTLALGQIVPRSSWCPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLVLRQIRADHMR 73
|.||..:...:||||.|..:| |.....|..|||.::|.||..:.|.:|..|:...|.::...|:
Rat 11 LLGLADSCCFVVPRSEWKALP-SECSKGLKKPVRYVVISHTAGSFCSSPDSCEQQARNVQLYQMK 74
Fly 74 R-KFRDIGYNFLIGGDGRIYEGLGFGIRGEH-APRYNSQSIGIAFIGNFQNAPGCPNPHPNR--- 133
: .:.|:.||||||.||.:|||.|:.|:|:| .|.:|..||||.|:|::.:. .|.....|
Rat 75 QLGWCDVAYNFLIGEDGHVYEGRGWTIKGDHTGPIWNPMSIGITFMGDYSHR--VPAKRALRAAL 137
Fly 134 ----CAASPGF 140
|..|.||
Rat 138 NLLKCGVSEGF 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
44/112 (39%) |
Pglyrp1 | NP_445825.1 |
PGRP |
21..161 |
CDD:128941 |
49/131 (37%) |
Information from Original Tools:
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