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Protein Alignment PGRP-SB2 and PGRP-LA
DIOPT Version :10
| Sequence 1: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_996026.1 |
Gene: | PGRP-LA / 39062 |
FlyBaseID: | FBgn0035975 |
Length: | 368 |
Species: | Drosophila melanogaster |
| Alignment Length: | 126 |
Identity: | 33/126 - (26%) |
| Similarity: | 56/126 - (44%) |
Gaps: | 26/126 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 IVPRSSW--------CPVPISPRMPRLMVPVRLIIIHH--TVTAPCFNPHQCQLVLRQIRADHMR 73
:|.|..| ..:| |..|:..::|.| ..:.||.|.::|.:.:|.|:...:.
Fly 183 VVDREQWGASKNSHGLTIP-------LKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDSAIA 240
Fly 74 RK-FRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNAPGCPNPHPNR 133
.| ..||..||.:..:|.||.|.|: :.|..|.:|::.|.|:|:: |...|.|.:
Fly 241 EKGLPDIQSNFYVSEEGNIYVGRGW----DWANTYANQTLAITFMGDY----GRFKPGPKQ 293
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
31/120 (26%) |
| PGRP-LA | NP_996026.1 |
PGRP |
181..322 |
CDD:128941 |
33/126 (26%) |
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