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Protein Alignment PGRP-SB2 and PGRP-LD
DIOPT Version :9
Sequence 1: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001137893.1 |
Gene: | PGRP-LD / 3771920 |
FlyBaseID: | FBgn0260458 |
Length: | 327 |
Species: | Drosophila melanogaster |
Alignment Length: | 138 |
Identity: | 37/138 - (26%) |
Similarity: | 60/138 - (43%) |
Gaps: | 27/138 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 LVLCGLTLALG-----------------QIVPRSSWCPVPISPRMPRLMVPVRL--IIIHHTVTA 52
||:|...|||. .||....|..:.:..| ..|..|:.: :|..||.:.
Fly 142 LVMCASALALAAYLLWRQTQTPDFGYRLSIVGHGIWSDMELQGR-GTLFDPIGVGTVIFTHTGSN 205
Fly 53 PCFNPHQCQLVLRQIRADHMRRKFRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNS-QSIGIAF 116
.|.: .|..||.::...|: .::.||||:.||.:::|..|:..|.::....|. .|:.:||
Fly 206 ECHD--DCPDVLHKLERSHV----GELPYNFLVAGDCQVFEAQGWHYRSQYPRDLNGIDSLVMAF 264
Fly 117 IGNFQNAP 124
:|||...|
Fly 265 VGNFSGRP 272
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
31/110 (28%) |
PGRP-LD | NP_001137893.1 |
PGRP |
169..306 |
CDD:128941 |
31/111 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440254 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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