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Protein Alignment PGRP-SB2 and PGRP-SC2
DIOPT Version :10
| Sequence 1: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
| Alignment Length: | 117 |
Identity: | 46/117 - (39%) |
| Similarity: | 66/117 - (56%) |
Gaps: | 2/117 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 LALVLCGLTLALGQIVPRSSWCPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLVLRQIRA 69
||::.|...:....|:.:|.|.....:.: ..|...:...:||||....|.....|...|:.|:|
Fly 9 LAVLFCAQAVLGVTIISKSEWGGRSATSK-TSLANYLSYAVIHHTAGNYCSTKAACITQLQNIQA 72
Fly 70 DHM-RRKFRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNF 120
.|| ...:.||||||||||||.:|||.|:.:.|.||..:||:||||:|:||:
Fly 73 YHMDSLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNY 124
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
43/104 (41%) |
| PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
43/105 (41%) |
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