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Protein Alignment PGRP-SB2 and Pglyrp2
DIOPT Version :9
Sequence 1: | NP_001261970.1 |
Gene: | PGRP-SB2 / 39869 |
FlyBaseID: | FBgn0043577 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038935975.1 |
Gene: | Pglyrp2 / 299567 |
RGDID: | 1359183 |
Length: | 522 |
Species: | Rattus norvegicus |
Alignment Length: | 159 |
Identity: | 49/159 - (30%) |
Similarity: | 68/159 - (42%) |
Gaps: | 35/159 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 QLALVLCGLT-------LALGQIVPRSSWCPVPISPRMPRLMVPVRLIIIHHTV--TAPCFNPHQ 59
|||.|....| |....|.||..|...|.......|.:|:.|:.:|||. ..||.....
Rat 332 QLAQVATFATKEFTEAFLGCPAIHPRCRWGAAPYRGHPTPLRLPLGLLYVHHTYVPAPPCTTFQS 396
Fly 60 CQLVLRQIRADHMR-RKFRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNA 123
|...:|.::..|.. |.:.||||:|::|.||.:|:|.|:...|.|...|||:..|:||:||:.
Rat 397 CAADMRSMQRFHQNVRGWADIGYSFVVGSDGYVYQGRGWHWVGAHTLGYNSRGFGVAFVGNYT-- 459
Fly 124 PGCPNPHPNRCAASPGFAQLFRGGSLPNE 152
||||:|
Rat 460 -----------------------GSLPSE 465
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SB2 | NP_001261970.1 |
PGRP |
18..>129 |
CDD:128941 |
38/113 (34%) |
Pglyrp2 | XP_038935975.1 |
PGRP |
352..497 |
CDD:128941 |
43/139 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345856 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.850 |
|
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