DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB2 and LOC1276947

DIOPT Version :10

Sequence 1:NP_001261970.1 Gene:PGRP-SB2 / 39869 FlyBaseID:FBgn0043577 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_316359.1 Gene:LOC1276947 / 1276947 VectorBaseID:AGAMI1_013240 Length:188 Species:Anopheles gambiae


Alignment Length:162 Identity:58/162 - (35%)
Similarity:81/162 - (50%) Gaps:29/162 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALVLCGLTLALGQIVPRSSW-------CPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLV 63
            ::.|.|::....:||.|:.|       ..:||.        |...:::|||..|.|.....|...
Mosquito    12 SICLAGVSAQCPRIVTRAQWGARAANTAQLPIR--------PAPWVVMHHTAGAACTTDAACAQQ 68

  Fly    64 LRQIRADHM-RRKFRDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNAPGCP 127
            :|.|::.|| ...:.|||||||:|.:|..|||.|:|.:|.|||.||.:|:|:..||.|.|  |.|
Mosquito    69 MRNIQSFHMDGNGWADIGYNFLVGENGAAYEGRGWGRQGAHAPGYNDRSVGMGVIGTFTN--GIP 131

  Fly   128 NPHPNRCAASPGFAQ--LFRGGSLPNEGHCLS 157
            |      ||:...||  :..|.||   ||..|
Mosquito   132 N------AAARNAAQQLISCGVSL---GHIAS 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB2NP_001261970.1 PGRP 18..>129 CDD:128941 45/118 (38%)
LOC1276947XP_316359.1 PGRP 23..163 CDD:128941 56/151 (37%)

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