DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SB2 and PGLYRP3

DIOPT Version :9

Sequence 1:NP_001261970.1 Gene:PGRP-SB2 / 39869 FlyBaseID:FBgn0043577 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens


Alignment Length:140 Identity:51/140 - (36%)
Similarity:72/140 - (51%) Gaps:32/140 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IVPRSSW------CPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLVLRQIRADHM-RRKF 76
            |:.||:|      |        |::.:|.:.:||.||....|.....||.|:|.|::.|| .|.|
Human   217 IIKRSAWEARETHC--------PKMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSFHMDTRNF 273

  Fly    77 RDIGYNFLIGGDGRIYEGLGFGIRGEHAPRYNSQSIGIAFIGNFQNAPGCPNPHPN--------- 132
            .||||:||:|.||.:|||:|:.|:|.|...:|..::||||||.|...|      ||         
Human   274 CDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKP------PNAAALEAAQD 332

  Fly   133 --RCAASPGF 140
              :||...|:
Human   333 LIQCAVVEGY 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SB2NP_001261970.1 PGRP 18..>129 CDD:128941 46/116 (40%)
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941
PGRP 215..355 CDD:128941 51/140 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152338
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1110472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.850

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